Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMX2-CTNND1H3BSU7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TMX2-CTNND1H3BSU7 SNORA78-201ENST00000459373 127 ntBASIC19.56■□□□□ 0.72
TMX2-CTNND1H3BSU7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.56■□□□□ 0.72
TMX2-CTNND1H3BSU7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.56■□□□□ 0.72
TMX2-CTNND1H3BSU7 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.56■□□□□ 0.72
TMX2-CTNND1H3BSU7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
TMX2-CTNND1H3BSU7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TMX2-CTNND1H3BSU7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMX2-CTNND1H3BSU7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMX2-CTNND1H3BSU7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.56■□□□□ 0.72
TMX2-CTNND1H3BSU7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.56■□□□□ 0.72
TMX2-CTNND1H3BSU7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.56■□□□□ 0.72
TMX2-CTNND1H3BSU7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMX2-CTNND1H3BSU7 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.56■□□□□ 0.72
TMX2-CTNND1H3BSU7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TMX2-CTNND1H3BSU7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TMX2-CTNND1H3BSU7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMX2-CTNND1H3BSU7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMX2-CTNND1H3BSU7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMX2-CTNND1H3BSU7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.55■□□□□ 0.72
TMX2-CTNND1H3BSU7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMX2-CTNND1H3BSU7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TMX2-CTNND1H3BSU7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMX2-CTNND1H3BSU7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TMX2-CTNND1H3BSU7 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.55■□□□□ 0.72
TMX2-CTNND1H3BSU7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMX2-CTNND1H3BSU7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.55■□□□□ 0.72
TMX2-CTNND1H3BSU7 AC233702.5-201ENST00000584107 538 ntBASIC19.55■□□□□ 0.72
TMX2-CTNND1H3BSU7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMX2-CTNND1H3BSU7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TMX2-CTNND1H3BSU7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.55■□□□□ 0.72
TMX2-CTNND1H3BSU7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TMX2-CTNND1H3BSU7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TMX2-CTNND1H3BSU7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 RPS2P55-201ENST00000397318 883 ntBASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 AC239809.2-201ENST00000415381 517 ntBASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 AC107956.1-201ENST00000494359 873 ntBASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 AL356652.1-201ENST00000615962 565 ntBASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 REXO1L12P-201ENST00000622156 912 ntBASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TMX2-CTNND1H3BSU7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 AC110285.5-201ENST00000611501 352 ntBASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TMX2-CTNND1H3BSU7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMX2-CTNND1H3BSU7 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMX2-CTNND1H3BSU7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TMX2-CTNND1H3BSU7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TMX2-CTNND1H3BSU7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms