Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 TREX1-205ENST00000625293 1783 ntBASIC17.68■□□□□ 0.42
NPIPB4C9JG80 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.68■□□□□ 0.42
NPIPB4C9JG80 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPIPB4C9JG80 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 MYC-209ENST00000641252 345 ntBASIC17.66■□□□□ 0.42
NPIPB4C9JG80 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPIPB4C9JG80 AC116351.2-201ENST00000606540 1585 ntBASIC17.66■□□□□ 0.42
NPIPB4C9JG80 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 AL390719.1-204ENST00000412397 1219 ntBASIC17.65■□□□□ 0.42
NPIPB4C9JG80 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.65■□□□□ 0.42
NPIPB4C9JG80 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NPIPB4C9JG80 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NPIPB4C9JG80 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NPIPB4C9JG80 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NPIPB4C9JG80 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms