Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
C4orf47A7E2U8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.56■□□□□ 0.72
C4orf47A7E2U8 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 KRT126P-201ENST00000549467 1181 ntBASIC19.56■□□□□ 0.72
C4orf47A7E2U8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 LINC01238-205ENST00000567549 1107 ntBASIC19.56■□□□□ 0.72
C4orf47A7E2U8 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.56■□□□□ 0.72
C4orf47A7E2U8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
C4orf47A7E2U8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.55■□□□□ 0.72
C4orf47A7E2U8 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.55■□□□□ 0.72
C4orf47A7E2U8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
C4orf47A7E2U8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
C4orf47A7E2U8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.55■□□□□ 0.72
C4orf47A7E2U8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.55■□□□□ 0.72
C4orf47A7E2U8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.55■□□□□ 0.72
C4orf47A7E2U8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
C4orf47A7E2U8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.55■□□□□ 0.72
C4orf47A7E2U8 AC022616.7-201ENST00000525383 220 ntBASIC19.55■□□□□ 0.72
C4orf47A7E2U8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.55■□□□□ 0.72
C4orf47A7E2U8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
C4orf47A7E2U8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
C4orf47A7E2U8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
C4orf47A7E2U8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.55■□□□□ 0.72
C4orf47A7E2U8 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.55■□□□□ 0.72
C4orf47A7E2U8 FBXW4P1-201ENST00000426721 2239 ntBASIC19.55■□□□□ 0.72
C4orf47A7E2U8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
C4orf47A7E2U8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 BX664615.1-201ENST00000443558 458 ntBASIC19.54■□□□□ 0.72
C4orf47A7E2U8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
C4orf47A7E2U8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
C4orf47A7E2U8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
C4orf47A7E2U8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C4orf47A7E2U8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
C4orf47A7E2U8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
C4orf47A7E2U8 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.53■□□□□ 0.72
C4orf47A7E2U8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.53■□□□□ 0.72
C4orf47A7E2U8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
C4orf47A7E2U8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
C4orf47A7E2U8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
C4orf47A7E2U8 AC063952.2-201ENST00000498792 1227 ntBASIC19.53■□□□□ 0.72
C4orf47A7E2U8 EGLN1P1-201ENST00000531623 762 ntBASIC19.53■□□□□ 0.72
C4orf47A7E2U8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
C4orf47A7E2U8 AL031985.4-201ENST00000642138 673 ntBASIC19.53■□□□□ 0.72
C4orf47A7E2U8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
C4orf47A7E2U8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C4orf47A7E2U8 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
C4orf47A7E2U8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.53■□□□□ 0.72
C4orf47A7E2U8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.53■□□□□ 0.72
C4orf47A7E2U8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
C4orf47A7E2U8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
C4orf47A7E2U8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
C4orf47A7E2U8 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
C4orf47A7E2U8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.52■□□□□ 0.72
C4orf47A7E2U8 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
C4orf47A7E2U8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
C4orf47A7E2U8 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.52■□□□□ 0.72
C4orf47A7E2U8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
C4orf47A7E2U8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
C4orf47A7E2U8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.52■□□□□ 0.72
C4orf47A7E2U8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms