Protein–RNA interactions for Protein: A6NKG5

RTL1, Retrotransposon-like protein 1, humanhuman

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1A6NKG5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RTL1A6NKG5 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RTL1A6NKG5 YBX1P10-201ENST00000444752 975 ntBASIC26.6■■□□□ 1.85
RTL1A6NKG5 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC26.6■■□□□ 1.85
RTL1A6NKG5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC26.6■■□□□ 1.85
RTL1A6NKG5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC26.6■■□□□ 1.85
RTL1A6NKG5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RTL1A6NKG5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC26.6■■□□□ 1.85
RTL1A6NKG5 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
RTL1A6NKG5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
RTL1A6NKG5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC26.6■■□□□ 1.85
RTL1A6NKG5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
RTL1A6NKG5 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC26.59■■□□□ 1.85
RTL1A6NKG5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC26.59■■□□□ 1.85
RTL1A6NKG5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RTL1A6NKG5 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
RTL1A6NKG5 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC26.59■■□□□ 1.85
RTL1A6NKG5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RTL1A6NKG5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RTL1A6NKG5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC26.59■■□□□ 1.85
RTL1A6NKG5 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RTL1A6NKG5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
RTL1A6NKG5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
RTL1A6NKG5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RTL1A6NKG5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
RTL1A6NKG5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RTL1A6NKG5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC26.59■■□□□ 1.85
RTL1A6NKG5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RTL1A6NKG5 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RTL1A6NKG5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC26.59■■□□□ 1.85
RTL1A6NKG5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RTL1A6NKG5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RTL1A6NKG5 RN7SL850P-201ENST00000579959 291 ntBASIC26.58■■□□□ 1.85
RTL1A6NKG5 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RTL1A6NKG5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RTL1A6NKG5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
RTL1A6NKG5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC26.58■■□□□ 1.85
RTL1A6NKG5 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
RTL1A6NKG5 FP700111.2-201ENST00000619190 1892 ntBASIC26.58■■□□□ 1.85
RTL1A6NKG5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.84
RTL1A6NKG5 AP006587.1-201ENST00000534129 1502 ntBASIC26.58■■□□□ 1.84
RTL1A6NKG5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC26.58■■□□□ 1.84
RTL1A6NKG5 FITM1-202ENST00000559294 800 ntBASIC26.58■■□□□ 1.84
RTL1A6NKG5 AL445675.2-201ENST00000620291 557 ntBASIC26.58■■□□□ 1.84
RTL1A6NKG5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC26.58■■□□□ 1.84
RTL1A6NKG5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTL1A6NKG5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC26.57■■□□□ 1.84
RTL1A6NKG5 BID-203ENST00000399765 1879 ntTSL 2 BASIC26.57■■□□□ 1.84
RTL1A6NKG5 AF106564.1-201ENST00000607058 2553 ntBASIC26.57■■□□□ 1.84
RTL1A6NKG5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC26.57■■□□□ 1.84
RTL1A6NKG5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTL1A6NKG5 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC26.57■■□□□ 1.84
RTL1A6NKG5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC26.57■■□□□ 1.84
RTL1A6NKG5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC26.57■■□□□ 1.84
RTL1A6NKG5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC26.57■■□□□ 1.84
RTL1A6NKG5 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC26.57■■□□□ 1.84
RTL1A6NKG5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC26.57■■□□□ 1.84
RTL1A6NKG5 CR392000.1-201ENST00000624770 1228 ntBASIC26.57■■□□□ 1.84
RTL1A6NKG5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RTL1A6NKG5 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
RTL1A6NKG5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RTL1A6NKG5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC26.56■■□□□ 1.84
RTL1A6NKG5 TFP1-202ENST00000475455 1573 ntBASIC26.56■■□□□ 1.84
RTL1A6NKG5 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
RTL1A6NKG5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
RTL1A6NKG5 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RTL1A6NKG5 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC26.56■■□□□ 1.84
RTL1A6NKG5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC26.56■■□□□ 1.84
RTL1A6NKG5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC26.55■■□□□ 1.84
RTL1A6NKG5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC26.55■■□□□ 1.84
RTL1A6NKG5 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RTL1A6NKG5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RTL1A6NKG5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
RTL1A6NKG5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
RTL1A6NKG5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC26.55■■□□□ 1.84
RTL1A6NKG5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RTL1A6NKG5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC26.55■■□□□ 1.84
RTL1A6NKG5 TMPOP1-202ENST00000424642 1267 ntBASIC26.55■■□□□ 1.84
RTL1A6NKG5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC26.55■■□□□ 1.84
RTL1A6NKG5 KRT18P16-201ENST00000510337 1294 ntBASIC26.55■■□□□ 1.84
RTL1A6NKG5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC26.55■■□□□ 1.84
RTL1A6NKG5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC26.55■■□□□ 1.84
RTL1A6NKG5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RTL1A6NKG5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.54■■□□□ 1.84
RTL1A6NKG5 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
RTL1A6NKG5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC26.54■■□□□ 1.84
RTL1A6NKG5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
RTL1A6NKG5 MESTP1-201ENST00000404287 994 ntBASIC26.54■■□□□ 1.84
RTL1A6NKG5 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC26.54■■□□□ 1.84
RTL1A6NKG5 MIR1238-201ENST00000408483 83 ntBASIC26.54■■□□□ 1.84
RTL1A6NKG5 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC26.54■■□□□ 1.84
RTL1A6NKG5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
RTL1A6NKG5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC26.54■■□□□ 1.84
RTL1A6NKG5 AC007225.1-201ENST00000566331 1836 ntBASIC26.53■■□□□ 1.84
RTL1A6NKG5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RTL1A6NKG5 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC26.53■■□□□ 1.84
RTL1A6NKG5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
RTL1A6NKG5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
RTL1A6NKG5 AL390955.1-201ENST00000428694 934 ntBASIC26.53■■□□□ 1.84
RTL1A6NKG5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms