Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TVP23AA6NH52 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.78■□□□□ 0.44
TVP23AA6NH52 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
TVP23AA6NH52 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TVP23AA6NH52 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.78■□□□□ 0.44
TVP23AA6NH52 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TVP23AA6NH52 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TVP23AA6NH52 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TVP23AA6NH52 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.78■□□□□ 0.44
TVP23AA6NH52 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.77■□□□□ 0.44
TVP23AA6NH52 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TVP23AA6NH52 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TVP23AA6NH52 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TVP23AA6NH52 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TVP23AA6NH52 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TVP23AA6NH52 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TVP23AA6NH52 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TVP23AA6NH52 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TVP23AA6NH52 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.77■□□□□ 0.44
TVP23AA6NH52 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TVP23AA6NH52 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TVP23AA6NH52 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TVP23AA6NH52 AL162412.1-201ENST00000567129 965 ntBASIC17.77■□□□□ 0.44
TVP23AA6NH52 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.77■□□□□ 0.44
TVP23AA6NH52 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.77■□□□□ 0.44
TVP23AA6NH52 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.77■□□□□ 0.44
TVP23AA6NH52 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.77■□□□□ 0.43
TVP23AA6NH52 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TVP23AA6NH52 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TVP23AA6NH52 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
TVP23AA6NH52 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TVP23AA6NH52 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.77■□□□□ 0.43
TVP23AA6NH52 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TVP23AA6NH52 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
TVP23AA6NH52 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TVP23AA6NH52 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TVP23AA6NH52 AC087289.5-201ENST00000586076 3175 ntBASIC17.76■□□□□ 0.43
TVP23AA6NH52 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.76■□□□□ 0.43
TVP23AA6NH52 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TVP23AA6NH52 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.76■□□□□ 0.43
TVP23AA6NH52 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TVP23AA6NH52 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
TVP23AA6NH52 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.76■□□□□ 0.43
TVP23AA6NH52 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.76■□□□□ 0.43
TVP23AA6NH52 RARRES2P4-201ENST00000514074 484 ntBASIC17.76■□□□□ 0.43
TVP23AA6NH52 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC17.76■□□□□ 0.43
TVP23AA6NH52 DUX4L16-201ENST00000555130 1264 ntBASIC17.76■□□□□ 0.43
TVP23AA6NH52 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.76■□□□□ 0.43
TVP23AA6NH52 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.76■□□□□ 0.43
TVP23AA6NH52 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TVP23AA6NH52 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TVP23AA6NH52 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TVP23AA6NH52 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TVP23AA6NH52 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.76■□□□□ 0.43
TVP23AA6NH52 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TVP23AA6NH52 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TVP23AA6NH52 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TVP23AA6NH52 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TVP23AA6NH52 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.75■□□□□ 0.43
TVP23AA6NH52 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.75■□□□□ 0.43
TVP23AA6NH52 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TVP23AA6NH52 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TVP23AA6NH52 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TVP23AA6NH52 AC068338.2-201ENST00000563278 1430 ntBASIC17.75■□□□□ 0.43
TVP23AA6NH52 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TVP23AA6NH52 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TVP23AA6NH52 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TVP23AA6NH52 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.75■□□□□ 0.43
TVP23AA6NH52 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TVP23AA6NH52 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.75■□□□□ 0.43
TVP23AA6NH52 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.75■□□□□ 0.43
TVP23AA6NH52 CNN2P6-201ENST00000439038 900 ntBASIC17.75■□□□□ 0.43
TVP23AA6NH52 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.75■□□□□ 0.43
TVP23AA6NH52 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.75■□□□□ 0.43
TVP23AA6NH52 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.75■□□□□ 0.43
TVP23AA6NH52 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TVP23AA6NH52 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TVP23AA6NH52 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TVP23AA6NH52 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TVP23AA6NH52 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TVP23AA6NH52 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TVP23AA6NH52 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.75■□□□□ 0.43
TVP23AA6NH52 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TVP23AA6NH52 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TVP23AA6NH52 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TVP23AA6NH52 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TVP23AA6NH52 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TVP23AA6NH52 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TVP23AA6NH52 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TVP23AA6NH52 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TVP23AA6NH52 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TVP23AA6NH52 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TVP23AA6NH52 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TVP23AA6NH52 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TVP23AA6NH52 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TVP23AA6NH52 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TVP23AA6NH52 MCRIP2P1-201ENST00000394346 511 ntBASIC17.74■□□□□ 0.43
TVP23AA6NH52 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TVP23AA6NH52 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TVP23AA6NH52 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms