Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV7S3A2A0A539 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.28■□□□□ 0.84
TCRBV7S3A2A0A539 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.28■□□□□ 0.84
TCRBV7S3A2A0A539 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV7S3A2A0A539 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.28■□□□□ 0.84
TCRBV7S3A2A0A539 AC009237.14-201ENST00000609975 1594 ntBASIC20.28■□□□□ 0.84
TCRBV7S3A2A0A539 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV7S3A2A0A539 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV7S3A2A0A539 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV7S3A2A0A539 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV7S3A2A0A539 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TCRBV7S3A2A0A539 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV7S3A2A0A539 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TCRBV7S3A2A0A539 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.27■□□□□ 0.84
TCRBV7S3A2A0A539 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV7S3A2A0A539 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.27■□□□□ 0.84
TCRBV7S3A2A0A539 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV7S3A2A0A539 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.27■□□□□ 0.84
TCRBV7S3A2A0A539 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV7S3A2A0A539 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.27■□□□□ 0.84
TCRBV7S3A2A0A539 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.27■□□□□ 0.84
TCRBV7S3A2A0A539 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV7S3A2A0A539 BID-214ENST00000617586 542 ntTSL 5 BASIC20.27■□□□□ 0.84
TCRBV7S3A2A0A539 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.27■□□□□ 0.84
TCRBV7S3A2A0A539 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.27■□□□□ 0.84
TCRBV7S3A2A0A539 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV7S3A2A0A539 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV7S3A2A0A539 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
TCRBV7S3A2A0A539 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.27■□□□□ 0.83
TCRBV7S3A2A0A539 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TCRBV7S3A2A0A539 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 AC093787.1-201ENST00000450396 207 ntBASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.25■□□□□ 0.83
TCRBV7S3A2A0A539 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 KRT17P1-201ENST00000399211 1546 ntBASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 KRT8P20-201ENST00000423953 1409 ntBASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 AC010980.2-201ENST00000587099 1412 ntBASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TCRBV7S3A2A0A539 AC018445.3-201ENST00000624177 1945 ntBASIC20.23■□□□□ 0.83
TCRBV7S3A2A0A539 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV7S3A2A0A539 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TCRBV7S3A2A0A539 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms