Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF103-CHMP3A0A140T963 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF103-CHMP3A0A140T963 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF103-CHMP3A0A140T963 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF103-CHMP3A0A140T963 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF103-CHMP3A0A140T963 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF103-CHMP3A0A140T963 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RNF103-CHMP3A0A140T963 AL158211.5-201ENST00000623583 2518 ntBASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 AC004408.2-201ENST00000623613 2777 ntBASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 MYCNOS-205ENST00000641950 531 ntBASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF103-CHMP3A0A140T963 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF103-CHMP3A0A140T963 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 TNXA-203ENST00000507684 2038 ntBASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 CDV3P1-201ENST00000471403 739 ntBASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 NTF6G-201ENST00000591094 616 ntBASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.12■□□□□ 0.65
RNF103-CHMP3A0A140T963 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms