Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IGKV3D-20A0A0C4DH25 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
IGKV3D-20A0A0C4DH25 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.82□□□□□ -0.04
IGKV3D-20A0A0C4DH25 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.82□□□□□ -0.04
IGKV3D-20A0A0C4DH25 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
IGKV3D-20A0A0C4DH25 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 NALT1-201ENST00000429224 738 ntTSL 5 BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 FAM21FP-204ENST00000608637 956 ntBASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 AC243732.1-201ENST00000612648 864 ntBASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 RBM17P2-201ENST00000616397 1405 ntBASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
IGKV3D-20A0A0C4DH25 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 AC027612.3-201ENST00000413684 1047 ntBASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 KRT18P20-201ENST00000548986 1279 ntBASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
IGKV3D-20A0A0C4DH25 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 AC105265.2-201ENST00000467189 838 ntBASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 STOX2-205ENST00000513034 807 ntTSL 3 BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
IGKV3D-20A0A0C4DH25 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.78□□□□□ -0.04
IGKV3D-20A0A0C4DH25 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGKV3D-20A0A0C4DH25 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
IGKV3D-20A0A0C4DH25 TNXA-203ENST00000507684 2038 ntBASIC14.78□□□□□ -0.04
IGKV3D-20A0A0C4DH25 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC14.78□□□□□ -0.04
IGKV3D-20A0A0C4DH25 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGKV3D-20A0A0C4DH25 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGKV3D-20A0A0C4DH25 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IGKV3D-20A0A0C4DH25 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGKV3D-20A0A0C4DH25 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGKV3D-20A0A0C4DH25 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGKV3D-20A0A0C4DH25 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IGKV3D-20A0A0C4DH25 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IGKV3D-20A0A0C4DH25 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IGKV3D-20A0A0C4DH25 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IGKV3D-20A0A0C4DH25 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
IGKV3D-20A0A0C4DH25 LINC02228-203ENST00000641970 1355 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms