Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 TSPY20P-201ENST00000450910 630 ntBASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 MIR4651-201ENST00000582622 73 ntBASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 AL121829.2-201ENST00000620908 328 ntBASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 ITM2C-210ENST00000620962 501 ntBASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 AL121906.2-201ENST00000621597 723 ntBASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAV25A0A0B4J276 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 KRT18P29-201ENST00000397031 1267 ntBASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 RPS2P52-201ENST00000469610 820 ntBASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 AC006058.3-201ENST00000606217 1069 ntBASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 DET1-207ENST00000564406 2315 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAV25A0A0B4J276 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 AC073314.1-201ENST00000568729 2216 ntBASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 PRKY-204ENST00000533551 1019 ntBASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAV25A0A0B4J276 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV25A0A0B4J276 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAV25A0A0B4J276 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV25A0A0B4J276 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV25A0A0B4J276 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV25A0A0B4J276 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV25A0A0B4J276 ABHD17AP1-201ENST00000358206 933 ntBASIC14.96□□□□□ -0.01
TRAV25A0A0B4J276 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV25A0A0B4J276 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV25A0A0B4J276 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.96□□□□□ -0.01
TRAV25A0A0B4J276 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
TRAV25A0A0B4J276 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAV25A0A0B4J276 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV25A0A0B4J276 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV25A0A0B4J276 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV25A0A0B4J276 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRAV25A0A0B4J276 BX119927.1-201ENST00000636596 1552 ntBASIC14.96□□□□□ -0.01
TRAV25A0A0B4J276 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAV25A0A0B4J276 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV25A0A0B4J276 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV25A0A0B4J276 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAV25A0A0B4J276 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms