Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 UBE2DNL-204ENST00000602536 740 ntBASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.68■□□□□ 0.26
TRBV6-7A0A0A0MS04 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 Z82202.1-201ENST00000623446 1880 ntBASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 AC087633.2-202ENST00000565166 1439 ntBASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV6-7A0A0A0MS04 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 KRT18P61-201ENST00000585825 1298 ntBASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 AL356652.1-201ENST00000615962 565 ntBASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 MYCNOS-205ENST00000641950 531 ntBASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV6-7A0A0A0MS04 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRBV6-7A0A0A0MS04 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms