Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRAV18A0A075B6X5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 AC027682.1-201ENST00000562846 899 ntBASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 KRT87P-202ENST00000534226 1464 ntBASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV18A0A075B6X5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 AC138907.5-202ENST00000569484 235 ntBASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAV18A0A075B6X5 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 AC079140.4-201ENST00000507448 529 ntBASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 AC012414.1-201ENST00000556676 535 ntBASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 TPRG1LP1-201ENST00000598702 760 ntBASIC17.1■□□□□ 0.33
TRAV18A0A075B6X5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms