Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.59■■□□□ 1.53
ZNF304Q9HCX3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZNF304Q9HCX3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZNF304Q9HCX3 AC127502.1-201ENST00000399971 1502 ntBASIC24.58■■□□□ 1.53
ZNF304Q9HCX3 HLA-V-202ENST00000446817 847 ntBASIC24.58■■□□□ 1.53
ZNF304Q9HCX3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
ZNF304Q9HCX3 LINC00273-201ENST00000539813 1452 ntBASIC24.57■■□□□ 1.52
ZNF304Q9HCX3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
ZNF304Q9HCX3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.56■■□□□ 1.52
ZNF304Q9HCX3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.56■■□□□ 1.52
ZNF304Q9HCX3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.56■■□□□ 1.52
ZNF304Q9HCX3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.56■■□□□ 1.52
ZNF304Q9HCX3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.56■■□□□ 1.52
ZNF304Q9HCX3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.56■■□□□ 1.52
ZNF304Q9HCX3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
ZNF304Q9HCX3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.55■■□□□ 1.52
ZNF304Q9HCX3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
ZNF304Q9HCX3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
ZNF304Q9HCX3 ST7-AS1-201ENST00000456775 1889 ntBASIC24.54■■□□□ 1.52
ZNF304Q9HCX3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.54■■□□□ 1.52
ZNF304Q9HCX3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.54■■□□□ 1.52
ZNF304Q9HCX3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.54■■□□□ 1.52
ZNF304Q9HCX3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.54■■□□□ 1.52
ZNF304Q9HCX3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.54■■□□□ 1.52
ZNF304Q9HCX3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ZNF304Q9HCX3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ZNF304Q9HCX3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.52■■□□□ 1.52
ZNF304Q9HCX3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
ZNF304Q9HCX3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
ZNF304Q9HCX3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.52■■□□□ 1.52
ZNF304Q9HCX3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ZNF304Q9HCX3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
ZNF304Q9HCX3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ZNF304Q9HCX3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ZNF304Q9HCX3 MIR3648-2-201ENST00000581792 180 ntBASIC24.51■■□□□ 1.51
ZNF304Q9HCX3 MIR3648-1-201ENST00000615959 180 ntBASIC24.51■■□□□ 1.51
ZNF304Q9HCX3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.51■■□□□ 1.51
ZNF304Q9HCX3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZNF304Q9HCX3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.5■■□□□ 1.51
ZNF304Q9HCX3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.49■■□□□ 1.51
ZNF304Q9HCX3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ZNF304Q9HCX3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.49■■□□□ 1.51
ZNF304Q9HCX3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 DUX4L13-201ENST00000554103 1267 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 AC016575.1-201ENST00000607026 382 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 DUX4L15-201ENST00000611059 1267 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 DUX4L23-201ENST00000615195 1269 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 DUX4L24-201ENST00000617576 1269 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 DUX4L22-201ENST00000618238 1269 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 DUX4L20-201ENST00000619712 1269 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 DUX4L21-201ENST00000622058 1269 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 DUX4L10-201ENST00000622460 1267 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 DUX4L25-201ENST00000624915 1269 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ZNF304Q9HCX3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ZNF304Q9HCX3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
ZNF304Q9HCX3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ZNF304Q9HCX3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
ZNF304Q9HCX3 CR559946.2-201ENST00000623684 991 ntBASIC24.46■■□□□ 1.51
ZNF304Q9HCX3 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.46■■□□□ 1.51
ZNF304Q9HCX3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
ZNF304Q9HCX3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
ZNF304Q9HCX3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ZNF304Q9HCX3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ZNF304Q9HCX3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.45■■□□□ 1.5
ZNF304Q9HCX3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ZNF304Q9HCX3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ZNF304Q9HCX3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.44■■□□□ 1.5
ZNF304Q9HCX3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ZNF304Q9HCX3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
ZNF304Q9HCX3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ZNF304Q9HCX3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.42■■□□□ 1.5
ZNF304Q9HCX3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.42■■□□□ 1.5
ZNF304Q9HCX3 MIR639-201ENST00000384974 98 ntBASIC24.41■■□□□ 1.5
ZNF304Q9HCX3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.41■■□□□ 1.5
ZNF304Q9HCX3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ZNF304Q9HCX3 AC135983.2-203ENST00000454486 1613 ntBASIC24.41■■□□□ 1.5
ZNF304Q9HCX3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ZNF304Q9HCX3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ZNF304Q9HCX3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
ZNF304Q9HCX3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ZNF304Q9HCX3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.39■■□□□ 1.49
ZNF304Q9HCX3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
ZNF304Q9HCX3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
ZNF304Q9HCX3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
ZNF304Q9HCX3 WHAMMP2-203ENST00000563942 1603 ntBASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms