Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.59■■□□□ 1.53
ZNF304Q9HCX3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZNF304Q9HCX3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
ZNF304Q9HCX3 AC127502.1-201ENST00000399971 1502 ntBASIC24.58■■□□□ 1.53
ZNF304Q9HCX3 HLA-V-202ENST00000446817 847 ntBASIC24.58■■□□□ 1.53
ZNF304Q9HCX3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
ZNF304Q9HCX3 LINC00273-201ENST00000539813 1452 ntBASIC24.57■■□□□ 1.52
ZNF304Q9HCX3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
ZNF304Q9HCX3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.56■■□□□ 1.52
ZNF304Q9HCX3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.56■■□□□ 1.52
ZNF304Q9HCX3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.56■■□□□ 1.52
ZNF304Q9HCX3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.56■■□□□ 1.52
ZNF304Q9HCX3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.56■■□□□ 1.52
ZNF304Q9HCX3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.56■■□□□ 1.52
ZNF304Q9HCX3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
ZNF304Q9HCX3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.55■■□□□ 1.52
ZNF304Q9HCX3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
ZNF304Q9HCX3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
ZNF304Q9HCX3 ST7-AS1-201ENST00000456775 1889 ntBASIC24.54■■□□□ 1.52
ZNF304Q9HCX3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.54■■□□□ 1.52
ZNF304Q9HCX3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.54■■□□□ 1.52
ZNF304Q9HCX3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.54■■□□□ 1.52
ZNF304Q9HCX3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.54■■□□□ 1.52
ZNF304Q9HCX3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.54■■□□□ 1.52
ZNF304Q9HCX3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
ZNF304Q9HCX3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ZNF304Q9HCX3 ST7-205ENST00000393446 2114 ntTSL 5 BASIC24.52■■□□□ 1.52
ZNF304Q9HCX3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
ZNF304Q9HCX3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
ZNF304Q9HCX3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.52■■□□□ 1.52
ZNF304Q9HCX3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ZNF304Q9HCX3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
ZNF304Q9HCX3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ZNF304Q9HCX3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ZNF304Q9HCX3 MIR3648-2-201ENST00000581792 180 ntBASIC24.51■■□□□ 1.51
ZNF304Q9HCX3 MIR3648-1-201ENST00000615959 180 ntBASIC24.51■■□□□ 1.51
ZNF304Q9HCX3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.51■■□□□ 1.51
ZNF304Q9HCX3 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
ZNF304Q9HCX3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.5■■□□□ 1.51
ZNF304Q9HCX3 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.49■■□□□ 1.51
ZNF304Q9HCX3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
ZNF304Q9HCX3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.49■■□□□ 1.51
ZNF304Q9HCX3 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 DUX4L13-201ENST00000554103 1267 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 AC016575.1-201ENST00000607026 382 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 DUX4L15-201ENST00000611059 1267 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 DUX4L23-201ENST00000615195 1269 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 DUX4L24-201ENST00000617576 1269 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 DUX4L22-201ENST00000618238 1269 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 DUX4L20-201ENST00000619712 1269 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 DUX4L21-201ENST00000622058 1269 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 DUX4L10-201ENST00000622460 1267 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 DUX4L25-201ENST00000624915 1269 ntBASIC24.48■■□□□ 1.51
ZNF304Q9HCX3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ZNF304Q9HCX3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
ZNF304Q9HCX3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
ZNF304Q9HCX3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ZNF304Q9HCX3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
ZNF304Q9HCX3 CR559946.2-201ENST00000623684 991 ntBASIC24.46■■□□□ 1.51
ZNF304Q9HCX3 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.46■■□□□ 1.51
ZNF304Q9HCX3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
ZNF304Q9HCX3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
ZNF304Q9HCX3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ZNF304Q9HCX3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ZNF304Q9HCX3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.45■■□□□ 1.5
ZNF304Q9HCX3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ZNF304Q9HCX3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ZNF304Q9HCX3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.44■■□□□ 1.5
ZNF304Q9HCX3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ZNF304Q9HCX3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
ZNF304Q9HCX3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 ST7-202ENST00000323984 2142 ntTSL 5 BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 ST7-207ENST00000393449 2127 ntTSL 5 BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ZNF304Q9HCX3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ZNF304Q9HCX3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.42■■□□□ 1.5
ZNF304Q9HCX3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.42■■□□□ 1.5
ZNF304Q9HCX3 MIR639-201ENST00000384974 98 ntBASIC24.41■■□□□ 1.5
ZNF304Q9HCX3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.41■■□□□ 1.5
ZNF304Q9HCX3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ZNF304Q9HCX3 AC135983.2-203ENST00000454486 1613 ntBASIC24.41■■□□□ 1.5
ZNF304Q9HCX3 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ZNF304Q9HCX3 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ZNF304Q9HCX3 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
ZNF304Q9HCX3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ZNF304Q9HCX3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.39■■□□□ 1.49
ZNF304Q9HCX3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
ZNF304Q9HCX3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
ZNF304Q9HCX3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
ZNF304Q9HCX3 WHAMMP2-203ENST00000563942 1603 ntBASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms