Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CHD6Q8TD26 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.55■■□□□ 1.52
CHD6Q8TD26 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.54■■□□□ 1.52
CHD6Q8TD26 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
CHD6Q8TD26 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.54■■□□□ 1.52
CHD6Q8TD26 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHD6Q8TD26 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHD6Q8TD26 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CHD6Q8TD26 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.52■■□□□ 1.52
CHD6Q8TD26 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CHD6Q8TD26 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CHD6Q8TD26 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CHD6Q8TD26 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.51■■□□□ 1.51
CHD6Q8TD26 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.49■■□□□ 1.51
CHD6Q8TD26 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CHD6Q8TD26 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
CHD6Q8TD26 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CHD6Q8TD26 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.47■■□□□ 1.51
CHD6Q8TD26 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.47■■□□□ 1.51
CHD6Q8TD26 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
CHD6Q8TD26 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.47■■□□□ 1.51
CHD6Q8TD26 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHD6Q8TD26 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.46■■□□□ 1.51
CHD6Q8TD26 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC24.46■■□□□ 1.51
CHD6Q8TD26 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHD6Q8TD26 AC009299.2-201ENST00000482477 511 ntBASIC24.45■■□□□ 1.5
CHD6Q8TD26 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHD6Q8TD26 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.44■■□□□ 1.5
CHD6Q8TD26 AL356441.2-201ENST00000443009 864 ntBASIC24.43■■□□□ 1.5
CHD6Q8TD26 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.43■■□□□ 1.5
CHD6Q8TD26 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.43■■□□□ 1.5
CHD6Q8TD26 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.42■■□□□ 1.5
CHD6Q8TD26 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHD6Q8TD26 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CHD6Q8TD26 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.41■■□□□ 1.5
CHD6Q8TD26 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.41■■□□□ 1.5
CHD6Q8TD26 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CHD6Q8TD26 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD6Q8TD26 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD6Q8TD26 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD6Q8TD26 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CHD6Q8TD26 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.4■■□□□ 1.5
CHD6Q8TD26 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CHD6Q8TD26 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CHD6Q8TD26 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CHD6Q8TD26 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC24.38■■□□□ 1.49
CHD6Q8TD26 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CHD6Q8TD26 GUSBP5-201ENST00000418136 578 ntBASIC24.38■■□□□ 1.49
CHD6Q8TD26 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.38■■□□□ 1.49
CHD6Q8TD26 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.38■■□□□ 1.49
CHD6Q8TD26 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHD6Q8TD26 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CHD6Q8TD26 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.37■■□□□ 1.49
CHD6Q8TD26 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CHD6Q8TD26 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.35■■□□□ 1.49
CHD6Q8TD26 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHD6Q8TD26 AC060814.1-201ENST00000554326 538 ntBASIC24.35■■□□□ 1.49
CHD6Q8TD26 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.34■■□□□ 1.49
CHD6Q8TD26 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
CHD6Q8TD26 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.34■■□□□ 1.49
CHD6Q8TD26 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHD6Q8TD26 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CHD6Q8TD26 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.33■■□□□ 1.48
CHD6Q8TD26 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
CHD6Q8TD26 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHD6Q8TD26 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHD6Q8TD26 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHD6Q8TD26 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHD6Q8TD26 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.3■■□□□ 1.48
CHD6Q8TD26 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CHD6Q8TD26 AC092296.2-201ENST00000589470 999 ntBASIC24.3■■□□□ 1.48
CHD6Q8TD26 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD6Q8TD26 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD6Q8TD26 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CHD6Q8TD26 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.28■■□□□ 1.48
CHD6Q8TD26 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
CHD6Q8TD26 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.28■■□□□ 1.48
CHD6Q8TD26 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD6Q8TD26 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.27■■□□□ 1.48
CHD6Q8TD26 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHD6Q8TD26 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC24.26■■□□□ 1.47
CHD6Q8TD26 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
CHD6Q8TD26 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHD6Q8TD26 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CHD6Q8TD26 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.26■■□□□ 1.47
CHD6Q8TD26 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD6Q8TD26 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD6Q8TD26 AC092666.2-201ENST00000613287 246 ntBASIC24.25■■□□□ 1.47
CHD6Q8TD26 AC129492.7-201ENST00000622992 756 ntBASIC24.25■■□□□ 1.47
CHD6Q8TD26 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CHD6Q8TD26 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CHD6Q8TD26 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
CHD6Q8TD26 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
CHD6Q8TD26 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
CHD6Q8TD26 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.23■■□□□ 1.47
CHD6Q8TD26 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CHD6Q8TD26 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CHD6Q8TD26 MIR638-201ENST00000385237 100 ntBASIC24.22■■□□□ 1.47
CHD6Q8TD26 AC008406.3-201ENST00000620001 1374 ntBASIC24.22■■□□□ 1.47
CHD6Q8TD26 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms