Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC018358.1-201ENST00000631079 1402 ntBASIC35.89■■■■□ 3.34
COL22A1Q8NFW1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC35.87■■■■□ 3.33
COL22A1Q8NFW1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC35.87■■■■□ 3.33
COL22A1Q8NFW1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC35.87■■■■□ 3.33
COL22A1Q8NFW1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC35.86■■■■□ 3.33
COL22A1Q8NFW1 AL033527.3-201ENST00000566366 1196 ntBASIC35.86■■■■□ 3.33
COL22A1Q8NFW1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
COL22A1Q8NFW1 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC35.86■■■■□ 3.33
COL22A1Q8NFW1 GFER-205ENST00000569451 517 ntTSL 5 BASIC35.86■■■■□ 3.33
COL22A1Q8NFW1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC35.85■■■■□ 3.33
COL22A1Q8NFW1 AC022413.1-201ENST00000624602 984 ntBASIC35.85■■■■□ 3.33
COL22A1Q8NFW1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC35.85■■■■□ 3.33
COL22A1Q8NFW1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC35.85■■■■□ 3.33
COL22A1Q8NFW1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC35.84■■■■□ 3.33
COL22A1Q8NFW1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
COL22A1Q8NFW1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
COL22A1Q8NFW1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
COL22A1Q8NFW1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
COL22A1Q8NFW1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC35.82■■■■□ 3.32
COL22A1Q8NFW1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC35.8■■■■□ 3.32
COL22A1Q8NFW1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC35.8■■■■□ 3.32
COL22A1Q8NFW1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC35.79■■■■□ 3.32
COL22A1Q8NFW1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
COL22A1Q8NFW1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC35.79■■■■□ 3.32
COL22A1Q8NFW1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC35.79■■■■□ 3.32
COL22A1Q8NFW1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC35.78■■■■□ 3.32
COL22A1Q8NFW1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC35.78■■■■□ 3.32
COL22A1Q8NFW1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
COL22A1Q8NFW1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC35.77■■■■□ 3.32
COL22A1Q8NFW1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
COL22A1Q8NFW1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC35.75■■■■□ 3.31
COL22A1Q8NFW1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC35.74■■■■□ 3.31
COL22A1Q8NFW1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
COL22A1Q8NFW1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC35.74■■■■□ 3.31
COL22A1Q8NFW1 U85056.1-201ENST00000616429 682 ntBASIC35.74■■■■□ 3.31
COL22A1Q8NFW1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC35.73■■■■□ 3.31
COL22A1Q8NFW1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC35.72■■■■□ 3.31
COL22A1Q8NFW1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC35.72■■■■□ 3.31
COL22A1Q8NFW1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC35.72■■■■□ 3.31
COL22A1Q8NFW1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC35.71■■■■□ 3.31
COL22A1Q8NFW1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
COL22A1Q8NFW1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
COL22A1Q8NFW1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC35.69■■■■□ 3.3
COL22A1Q8NFW1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
COL22A1Q8NFW1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC35.67■■■■□ 3.3
COL22A1Q8NFW1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
COL22A1Q8NFW1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
COL22A1Q8NFW1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
COL22A1Q8NFW1 AC060814.1-201ENST00000554326 538 ntBASIC35.65■■■■□ 3.3
COL22A1Q8NFW1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
COL22A1Q8NFW1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
COL22A1Q8NFW1 KRT18P60-201ENST00000312876 1297 ntBASIC35.63■■■■□ 3.29
COL22A1Q8NFW1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC35.63■■■■□ 3.29
COL22A1Q8NFW1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC35.62■■■■□ 3.29
COL22A1Q8NFW1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC35.61■■■■□ 3.29
COL22A1Q8NFW1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC35.61■■■■□ 3.29
COL22A1Q8NFW1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC35.61■■■■□ 3.29
COL22A1Q8NFW1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
COL22A1Q8NFW1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC35.61■■■■□ 3.29
COL22A1Q8NFW1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
COL22A1Q8NFW1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC35.59■■■■□ 3.29
COL22A1Q8NFW1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC35.59■■■■□ 3.29
COL22A1Q8NFW1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC35.58■■■■□ 3.29
COL22A1Q8NFW1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC35.58■■■■□ 3.29
COL22A1Q8NFW1 RARRES2P1-201ENST00000474487 481 ntBASIC35.58■■■■□ 3.29
COL22A1Q8NFW1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
COL22A1Q8NFW1 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC35.58■■■■□ 3.29
COL22A1Q8NFW1 TSPY13P-201ENST00000338964 914 ntBASIC35.57■■■■□ 3.28
COL22A1Q8NFW1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC35.57■■■■□ 3.28
COL22A1Q8NFW1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC35.56■■■■□ 3.28
COL22A1Q8NFW1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
COL22A1Q8NFW1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
COL22A1Q8NFW1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
COL22A1Q8NFW1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC35.54■■■■□ 3.28
COL22A1Q8NFW1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC35.52■■■■□ 3.28
COL22A1Q8NFW1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC35.52■■■■□ 3.28
COL22A1Q8NFW1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC35.51■■■■□ 3.28
COL22A1Q8NFW1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC35.51■■■■□ 3.28
COL22A1Q8NFW1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
COL22A1Q8NFW1 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
COL22A1Q8NFW1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC35.5■■■■□ 3.27
COL22A1Q8NFW1 AC092296.2-201ENST00000589470 999 ntBASIC35.5■■■■□ 3.27
COL22A1Q8NFW1 AC004987.1-201ENST00000428627 508 ntBASIC35.49■■■■□ 3.27
COL22A1Q8NFW1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
COL22A1Q8NFW1 AC148477.6-201ENST00000623746 465 ntBASIC35.49■■■■□ 3.27
COL22A1Q8NFW1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC35.49■■■■□ 3.27
COL22A1Q8NFW1 AC120057.4-201ENST00000624722 1615 ntBASIC35.48■■■■□ 3.27
COL22A1Q8NFW1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC35.47■■■■□ 3.27
COL22A1Q8NFW1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC35.47■■■■□ 3.27
COL22A1Q8NFW1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC35.46■■■■□ 3.27
COL22A1Q8NFW1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
COL22A1Q8NFW1 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
COL22A1Q8NFW1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC35.45■■■■□ 3.27
COL22A1Q8NFW1 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
COL22A1Q8NFW1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC35.45■■■■□ 3.27
COL22A1Q8NFW1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
COL22A1Q8NFW1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
COL22A1Q8NFW1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC35.43■■■■□ 3.26
COL22A1Q8NFW1 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
COL22A1Q8NFW1 ATP5G2P3-201ENST00000429083 425 ntBASIC35.43■■■■□ 3.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms