Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNEP1R1Q8N9A8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
CNEP1R1Q8N9A8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CNEP1R1Q8N9A8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CNEP1R1Q8N9A8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.29
CNEP1R1Q8N9A8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CNEP1R1Q8N9A8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.08■■□□□ 1.29
CNEP1R1Q8N9A8 CR559946.2-201ENST00000623684 991 ntBASIC23.08■■□□□ 1.29
CNEP1R1Q8N9A8 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.07■■□□□ 1.28
CNEP1R1Q8N9A8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CNEP1R1Q8N9A8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CNEP1R1Q8N9A8 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.06■■□□□ 1.28
CNEP1R1Q8N9A8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.06■■□□□ 1.28
CNEP1R1Q8N9A8 MIR639-201ENST00000384974 98 ntBASIC23.05■■□□□ 1.28
CNEP1R1Q8N9A8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CNEP1R1Q8N9A8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CNEP1R1Q8N9A8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.05■■□□□ 1.28
CNEP1R1Q8N9A8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CNEP1R1Q8N9A8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CNEP1R1Q8N9A8 AC127502.1-201ENST00000399971 1502 ntBASIC23.04■■□□□ 1.28
CNEP1R1Q8N9A8 LINC00273-201ENST00000539813 1452 ntBASIC23.04■■□□□ 1.28
CNEP1R1Q8N9A8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.04■■□□□ 1.28
CNEP1R1Q8N9A8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.04■■□□□ 1.28
CNEP1R1Q8N9A8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CNEP1R1Q8N9A8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.03■■□□□ 1.28
CNEP1R1Q8N9A8 DUX4L13-201ENST00000554103 1267 ntBASIC23.03■■□□□ 1.28
CNEP1R1Q8N9A8 DUX4L15-201ENST00000611059 1267 ntBASIC23.03■■□□□ 1.28
CNEP1R1Q8N9A8 DUX4L23-201ENST00000615195 1269 ntBASIC23.03■■□□□ 1.28
CNEP1R1Q8N9A8 DUX4L24-201ENST00000617576 1269 ntBASIC23.03■■□□□ 1.28
CNEP1R1Q8N9A8 DUX4L22-201ENST00000618238 1269 ntBASIC23.03■■□□□ 1.28
CNEP1R1Q8N9A8 DUX4L20-201ENST00000619712 1269 ntBASIC23.03■■□□□ 1.28
CNEP1R1Q8N9A8 DUX4L21-201ENST00000622058 1269 ntBASIC23.03■■□□□ 1.28
CNEP1R1Q8N9A8 DUX4L10-201ENST00000622460 1267 ntBASIC23.03■■□□□ 1.28
CNEP1R1Q8N9A8 DUX4L25-201ENST00000624915 1269 ntBASIC23.03■■□□□ 1.28
CNEP1R1Q8N9A8 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CNEP1R1Q8N9A8 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.03■■□□□ 1.28
CNEP1R1Q8N9A8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CNEP1R1Q8N9A8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CNEP1R1Q8N9A8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
CNEP1R1Q8N9A8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.02■■□□□ 1.28
CNEP1R1Q8N9A8 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CNEP1R1Q8N9A8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CNEP1R1Q8N9A8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.01■■□□□ 1.27
CNEP1R1Q8N9A8 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.01■■□□□ 1.27
CNEP1R1Q8N9A8 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CNEP1R1Q8N9A8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CNEP1R1Q8N9A8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23■■□□□ 1.27
CNEP1R1Q8N9A8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CNEP1R1Q8N9A8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CNEP1R1Q8N9A8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23■■□□□ 1.27
CNEP1R1Q8N9A8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23■■□□□ 1.27
CNEP1R1Q8N9A8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CNEP1R1Q8N9A8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
CNEP1R1Q8N9A8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CNEP1R1Q8N9A8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CNEP1R1Q8N9A8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CNEP1R1Q8N9A8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CNEP1R1Q8N9A8 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC22.98■■□□□ 1.27
CNEP1R1Q8N9A8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CNEP1R1Q8N9A8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.98■■□□□ 1.27
CNEP1R1Q8N9A8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CNEP1R1Q8N9A8 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.97■■□□□ 1.27
CNEP1R1Q8N9A8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.97■■□□□ 1.27
CNEP1R1Q8N9A8 MIR4449-201ENST00000578365 66 ntBASIC22.97■■□□□ 1.27
CNEP1R1Q8N9A8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.97■■□□□ 1.27
CNEP1R1Q8N9A8 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CNEP1R1Q8N9A8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CNEP1R1Q8N9A8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CNEP1R1Q8N9A8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CNEP1R1Q8N9A8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CNEP1R1Q8N9A8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.93■■□□□ 1.26
CNEP1R1Q8N9A8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNEP1R1Q8N9A8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.92■■□□□ 1.26
CNEP1R1Q8N9A8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNEP1R1Q8N9A8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
CNEP1R1Q8N9A8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
CNEP1R1Q8N9A8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
CNEP1R1Q8N9A8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
CNEP1R1Q8N9A8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
CNEP1R1Q8N9A8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.9■■□□□ 1.26
CNEP1R1Q8N9A8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNEP1R1Q8N9A8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNEP1R1Q8N9A8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CNEP1R1Q8N9A8 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CNEP1R1Q8N9A8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.89■■□□□ 1.25
CNEP1R1Q8N9A8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
CNEP1R1Q8N9A8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CNEP1R1Q8N9A8 ST7-AS1-201ENST00000456775 1889 ntBASIC22.88■■□□□ 1.25
CNEP1R1Q8N9A8 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC22.88■■□□□ 1.25
CNEP1R1Q8N9A8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.88■■□□□ 1.25
CNEP1R1Q8N9A8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.88■■□□□ 1.25
CNEP1R1Q8N9A8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CNEP1R1Q8N9A8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CNEP1R1Q8N9A8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CNEP1R1Q8N9A8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
CNEP1R1Q8N9A8 AC135983.2-203ENST00000454486 1613 ntBASIC22.86■■□□□ 1.25
CNEP1R1Q8N9A8 WHAMMP2-203ENST00000563942 1603 ntBASIC22.86■■□□□ 1.25
CNEP1R1Q8N9A8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.86■■□□□ 1.25
CNEP1R1Q8N9A8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CNEP1R1Q8N9A8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms