Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC44A2Q8IWA5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC44A2Q8IWA5 AL139393.2-201ENST00000608721 2025 ntBASIC24.42■■□□□ 1.5
SLC44A2Q8IWA5 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SLC44A2Q8IWA5 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
SLC44A2Q8IWA5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.42■■□□□ 1.5
SLC44A2Q8IWA5 AP006261.1-201ENST00000584783 668 ntBASIC24.42■■□□□ 1.5
SLC44A2Q8IWA5 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SLC44A2Q8IWA5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.41■■□□□ 1.5
SLC44A2Q8IWA5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.41■■□□□ 1.5
SLC44A2Q8IWA5 MIR3665-201ENST00000578708 105 ntBASIC24.41■■□□□ 1.5
SLC44A2Q8IWA5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SLC44A2Q8IWA5 DUX4L28-201ENST00000623687 678 ntBASIC24.41■■□□□ 1.5
SLC44A2Q8IWA5 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
SLC44A2Q8IWA5 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC44A2Q8IWA5 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC44A2Q8IWA5 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC44A2Q8IWA5 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SLC44A2Q8IWA5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.4■■□□□ 1.5
SLC44A2Q8IWA5 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC44A2Q8IWA5 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SLC44A2Q8IWA5 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
SLC44A2Q8IWA5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SLC44A2Q8IWA5 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
SLC44A2Q8IWA5 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC44A2Q8IWA5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.37■■□□□ 1.49
SLC44A2Q8IWA5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC44A2Q8IWA5 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC44A2Q8IWA5 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
SLC44A2Q8IWA5 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC44A2Q8IWA5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.36■■□□□ 1.49
SLC44A2Q8IWA5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SLC44A2Q8IWA5 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SLC44A2Q8IWA5 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC44A2Q8IWA5 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC44A2Q8IWA5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.35■■□□□ 1.49
SLC44A2Q8IWA5 AL162393.1-201ENST00000437852 946 ntBASIC24.35■■□□□ 1.49
SLC44A2Q8IWA5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.35■■□□□ 1.49
SLC44A2Q8IWA5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.35■■□□□ 1.49
SLC44A2Q8IWA5 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC44A2Q8IWA5 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC44A2Q8IWA5 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC44A2Q8IWA5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.33■■□□□ 1.49
SLC44A2Q8IWA5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC44A2Q8IWA5 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
SLC44A2Q8IWA5 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC44A2Q8IWA5 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC44A2Q8IWA5 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
SLC44A2Q8IWA5 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.31■■□□□ 1.48
SLC44A2Q8IWA5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC44A2Q8IWA5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.31■■□□□ 1.48
SLC44A2Q8IWA5 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.31■■□□□ 1.48
SLC44A2Q8IWA5 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SLC44A2Q8IWA5 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC44A2Q8IWA5 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SLC44A2Q8IWA5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC44A2Q8IWA5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.29■■□□□ 1.48
SLC44A2Q8IWA5 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC44A2Q8IWA5 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLC44A2Q8IWA5 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.28■■□□□ 1.48
SLC44A2Q8IWA5 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SLC44A2Q8IWA5 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC24.28■■□□□ 1.48
SLC44A2Q8IWA5 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.27■■□□□ 1.48
SLC44A2Q8IWA5 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.27■■□□□ 1.48
SLC44A2Q8IWA5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SLC44A2Q8IWA5 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SLC44A2Q8IWA5 AC087741.3-201ENST00000624270 1347 ntBASIC24.26■■□□□ 1.47
SLC44A2Q8IWA5 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SLC44A2Q8IWA5 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
SLC44A2Q8IWA5 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.24■■□□□ 1.47
SLC44A2Q8IWA5 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC44A2Q8IWA5 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
SLC44A2Q8IWA5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC44A2Q8IWA5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC44A2Q8IWA5 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SLC44A2Q8IWA5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SLC44A2Q8IWA5 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
SLC44A2Q8IWA5 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SLC44A2Q8IWA5 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SLC44A2Q8IWA5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
SLC44A2Q8IWA5 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.22■■□□□ 1.47
SLC44A2Q8IWA5 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
SLC44A2Q8IWA5 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SLC44A2Q8IWA5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SLC44A2Q8IWA5 AC142086.6-201ENST00000621154 1765 ntBASIC24.21■■□□□ 1.47
SLC44A2Q8IWA5 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.21■■□□□ 1.47
SLC44A2Q8IWA5 AC108673.1-201ENST00000510422 1159 ntBASIC24.21■■□□□ 1.47
SLC44A2Q8IWA5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.21■■□□□ 1.47
SLC44A2Q8IWA5 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
SLC44A2Q8IWA5 DRD5P2-201ENST00000421395 2012 ntBASIC24.2■■□□□ 1.47
SLC44A2Q8IWA5 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
SLC44A2Q8IWA5 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
SLC44A2Q8IWA5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.2■■□□□ 1.46
SLC44A2Q8IWA5 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SLC44A2Q8IWA5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.19■■□□□ 1.46
SLC44A2Q8IWA5 RPS2P35-201ENST00000443417 897 ntBASIC24.19■■□□□ 1.46
SLC44A2Q8IWA5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SLC44A2Q8IWA5 MIR6090-201ENST00000622481 60 ntBASIC24.18■■□□□ 1.46
SLC44A2Q8IWA5 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SLC44A2Q8IWA5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms