Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LCA10Q71F78 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LCA10Q71F78 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LCA10Q71F78 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LCA10Q71F78 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LCA10Q71F78 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LCA10Q71F78 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LCA10Q71F78 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LCA10Q71F78 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC13.84□□□□□ -0.19
LCA10Q71F78 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LCA10Q71F78 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LCA10Q71F78 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC13.84□□□□□ -0.19
LCA10Q71F78 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LCA10Q71F78 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC13.83□□□□□ -0.2
LCA10Q71F78 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LCA10Q71F78 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC13.83□□□□□ -0.2
LCA10Q71F78 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC13.83□□□□□ -0.2
LCA10Q71F78 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LCA10Q71F78 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LCA10Q71F78 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LCA10Q71F78 AC142086.6-201ENST00000621154 1765 ntBASIC13.82□□□□□ -0.2
LCA10Q71F78 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LCA10Q71F78 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LCA10Q71F78 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
LCA10Q71F78 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LCA10Q71F78 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LCA10Q71F78 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LCA10Q71F78 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LCA10Q71F78 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LCA10Q71F78 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LCA10Q71F78 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC13.8□□□□□ -0.2
LCA10Q71F78 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LCA10Q71F78 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LCA10Q71F78 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LCA10Q71F78 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LCA10Q71F78 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCA10Q71F78 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCA10Q71F78 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LCA10Q71F78 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCA10Q71F78 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCA10Q71F78 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LCA10Q71F78 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC13.77□□□□□ -0.21
LCA10Q71F78 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LCA10Q71F78 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LCA10Q71F78 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LCA10Q71F78 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LCA10Q71F78 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LCA10Q71F78 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LCA10Q71F78 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LCA10Q71F78 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LCA10Q71F78 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LCA10Q71F78 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC13.75□□□□□ -0.21
LCA10Q71F78 AC093323.1-202ENST00000635031 2045 ntBASIC13.75□□□□□ -0.21
LCA10Q71F78 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
LCA10Q71F78 CLDN5-201ENST00000403084 2357 ntBASIC13.75□□□□□ -0.21
LCA10Q71F78 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC13.75□□□□□ -0.21
LCA10Q71F78 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC13.74□□□□□ -0.21
LCA10Q71F78 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
LCA10Q71F78 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
LCA10Q71F78 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LCA10Q71F78 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LCA10Q71F78 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LCA10Q71F78 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LCA10Q71F78 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LCA10Q71F78 LINC00543-201ENST00000567234 1845 ntBASIC13.73□□□□□ -0.21
LCA10Q71F78 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LCA10Q71F78 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC13.73□□□□□ -0.21
LCA10Q71F78 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
LCA10Q71F78 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC13.72□□□□□ -0.21
LCA10Q71F78 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC13.72□□□□□ -0.21
LCA10Q71F78 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
LCA10Q71F78 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LCA10Q71F78 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LCA10Q71F78 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LCA10Q71F78 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LCA10Q71F78 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LCA10Q71F78 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LCA10Q71F78 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LCA10Q71F78 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LCA10Q71F78 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
LCA10Q71F78 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LCA10Q71F78 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC13.7□□□□□ -0.22
LCA10Q71F78 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC13.7□□□□□ -0.22
LCA10Q71F78 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC13.7□□□□□ -0.22
LCA10Q71F78 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC13.7□□□□□ -0.22
LCA10Q71F78 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC13.69□□□□□ -0.22
LCA10Q71F78 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LCA10Q71F78 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LCA10Q71F78 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LCA10Q71F78 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LCA10Q71F78 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LCA10Q71F78 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
LCA10Q71F78 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LCA10Q71F78 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LCA10Q71F78 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC13.68□□□□□ -0.22
LCA10Q71F78 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LCA10Q71F78 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC13.68□□□□□ -0.22
LCA10Q71F78 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LCA10Q71F78 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LCA10Q71F78 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms