Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
HIST1H3AP68431 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
HIST1H3AP68431 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.72■■□□□ 1.23
HIST1H3AP68431 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
HIST1H3AP68431 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.71■■□□□ 1.23
HIST1H3AP68431 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.71■■□□□ 1.23
HIST1H3AP68431 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
HIST1H3AP68431 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.7■■□□□ 1.23
HIST1H3AP68431 MIR3665-201ENST00000578708 105 ntBASIC22.7■■□□□ 1.22
HIST1H3AP68431 AP006261.1-201ENST00000584783 668 ntBASIC22.7■■□□□ 1.22
HIST1H3AP68431 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
HIST1H3AP68431 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HIST1H3AP68431 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
HIST1H3AP68431 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.69■■□□□ 1.22
HIST1H3AP68431 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC22.69■■□□□ 1.22
HIST1H3AP68431 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
HIST1H3AP68431 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
HIST1H3AP68431 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.68■■□□□ 1.22
HIST1H3AP68431 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
HIST1H3AP68431 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC22.67■■□□□ 1.22
HIST1H3AP68431 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
HIST1H3AP68431 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HIST1H3AP68431 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
HIST1H3AP68431 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.66■■□□□ 1.22
HIST1H3AP68431 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
HIST1H3AP68431 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
HIST1H3AP68431 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
HIST1H3AP68431 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
HIST1H3AP68431 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.65■■□□□ 1.22
HIST1H3AP68431 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
HIST1H3AP68431 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
HIST1H3AP68431 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
HIST1H3AP68431 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HIST1H3AP68431 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HIST1H3AP68431 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HIST1H3AP68431 AC108673.1-201ENST00000510422 1159 ntBASIC22.64■■□□□ 1.21
HIST1H3AP68431 NRG1-221ENST00000614767 762 ntTSL 5 BASIC22.64■■□□□ 1.21
HIST1H3AP68431 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
HIST1H3AP68431 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
HIST1H3AP68431 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HIST1H3AP68431 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HIST1H3AP68431 MIR6090-201ENST00000622481 60 ntBASIC22.6■■□□□ 1.21
HIST1H3AP68431 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
HIST1H3AP68431 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
HIST1H3AP68431 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.6■■□□□ 1.21
HIST1H3AP68431 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
HIST1H3AP68431 DRD5P2-201ENST00000421395 2012 ntBASIC22.58■■□□□ 1.21
HIST1H3AP68431 AC142086.6-201ENST00000621154 1765 ntBASIC22.58■■□□□ 1.21
HIST1H3AP68431 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
HIST1H3AP68431 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.58■■□□□ 1.21
HIST1H3AP68431 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
HIST1H3AP68431 AL162393.1-201ENST00000437852 946 ntBASIC22.57■■□□□ 1.2
HIST1H3AP68431 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
HIST1H3AP68431 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.57■■□□□ 1.2
HIST1H3AP68431 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HIST1H3AP68431 AC087741.3-201ENST00000624270 1347 ntBASIC22.57■■□□□ 1.2
HIST1H3AP68431 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HIST1H3AP68431 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HIST1H3AP68431 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
HIST1H3AP68431 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HIST1H3AP68431 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.55■■□□□ 1.2
HIST1H3AP68431 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
HIST1H3AP68431 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HIST1H3AP68431 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HIST1H3AP68431 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HIST1H3AP68431 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
HIST1H3AP68431 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.53■■□□□ 1.2
HIST1H3AP68431 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.53■■□□□ 1.2
HIST1H3AP68431 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.52■■□□□ 1.2
HIST1H3AP68431 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.52■■□□□ 1.2
HIST1H3AP68431 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HIST1H3AP68431 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.52■■□□□ 1.2
HIST1H3AP68431 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HIST1H3AP68431 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.51■■□□□ 1.19
HIST1H3AP68431 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.51■■□□□ 1.19
HIST1H3AP68431 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HIST1H3AP68431 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HIST1H3AP68431 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HIST1H3AP68431 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.51■■□□□ 1.19
HIST1H3AP68431 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.51■■□□□ 1.19
HIST1H3AP68431 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
HIST1H3AP68431 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
HIST1H3AP68431 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
HIST1H3AP68431 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HIST1H3AP68431 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
HIST1H3AP68431 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
HIST1H3AP68431 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HIST1H3AP68431 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HIST1H3AP68431 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HIST1H3AP68431 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HIST1H3AP68431 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.49■■□□□ 1.19
HIST1H3AP68431 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HIST1H3AP68431 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
HIST1H3AP68431 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
HIST1H3AP68431 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HIST1H3AP68431 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HIST1H3AP68431 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.46■■□□□ 1.19
HIST1H3AP68431 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HIST1H3AP68431 AC135983.2-203ENST00000454486 1613 ntBASIC22.46■■□□□ 1.19
HIST1H3AP68431 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms