Protein–RNA interactions for Protein: P49957

TRM9, tRNA (carboxymethyluridine(34)-5-O)-methyltransferase, yeastyeast

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRM9P49957 RFC1YOR217W 2586 nt7.8□□□□□ -1.16
TRM9P49957 YOR343CYOR343C 327 nt7.8□□□□□ -1.16
TRM9P49957 ITR2YOL103W 1830 nt7.8□□□□□ -1.16
TRM9P49957 TOK1YJL093C 2076 nt7.79□□□□□ -1.16
TRM9P49957 YLR280CYLR280C 351 nt7.79□□□□□ -1.16
TRM9P49957 HAP5YOR358W 729 nt7.79□□□□□ -1.16
TRM9P49957 PAU21YOR394W 495 nt7.79□□□□□ -1.16
TRM9P49957 PAU22YPL282C 495 nt7.79□□□□□ -1.16
TRM9P49957 YMR265CYMR265C 1386 nt7.79□□□□□ -1.16
TRM9P49957 MET1YKR069W 1782 nt7.79□□□□□ -1.16
TRM9P49957 ARO8YGL202W 1503 nt7.78□□□□□ -1.16
TRM9P49957 RPL12BYDR418W 498 nt7.77□□□□□ -1.17
TRM9P49957 RPN14YGL004C 1254 nt7.77□□□□□ -1.17
TRM9P49957 YPL108WYPL108W 507 nt7.76□□□□□ -1.17
TRM9P49957 VMA11YPL234C 495 nt7.76□□□□□ -1.17
TRM9P49957 YPT11YNL304W 1254 nt7.75□□□□□ -1.17
TRM9P49957 SRP54YPR088C 1626 nt7.74□□□□□ -1.17
TRM9P49957 TGA1tA(UGC)A 73 nt7.74□□□□□ -1.17
TRM9P49957 tA(UGC)EtA(UGC)E 73 nt7.74□□□□□ -1.17
TRM9P49957 tA(UGC)GtA(UGC)G 73 nt7.74□□□□□ -1.17
TRM9P49957 tA(UGC)LtA(UGC)L 73 nt7.74□□□□□ -1.17
TRM9P49957 tA(UGC)OtA(UGC)O 73 nt7.74□□□□□ -1.17
TRM9P49957 YFR020WYFR020W 699 nt7.74□□□□□ -1.17
TRM9P49957 HRA1HRA1 564 nt7.74□□□□□ -1.17
TRM9P49957 SAN1YDR143C 1833 nt7.73□□□□□ -1.17
TRM9P49957 PSD1YNL169C 1503 nt7.73□□□□□ -1.17
TRM9P49957 YHR219WYHR219W 1875 nt7.72□□□□□ -1.17
TRM9P49957 GRH1YDR517W 1119 nt7.72□□□□□ -1.17
TRM9P49957 YJL160CYJL160C 864 nt7.72□□□□□ -1.17
TRM9P49957 YKL053WYKL053W 375 nt7.72□□□□□ -1.17
TRM9P49957 CRC1YOR100C 984 nt7.72□□□□□ -1.17
TRM9P49957 ZAP1YJL056C 2643 nt7.72□□□□□ -1.17
TRM9P49957 KES1YPL145C 1305 nt7.72□□□□□ -1.17
TRM9P49957 COQ8YGL119W 1506 nt7.72□□□□□ -1.17
TRM9P49957 YRF1-2YER190W 5046 nt7.71□□□□□ -1.18
TRM9P49957 YAL016C-AYAL016C-A 315 nt7.71□□□□□ -1.18
TRM9P49957 YRF1-3YGR296W 5580 nt7.7□□□□□ -1.18
TRM9P49957 YRF1-6YNL339C 5580 nt7.7□□□□□ -1.18
TRM9P49957 YRF1-7YPL283C 5580 nt7.7□□□□□ -1.18
TRM9P49957 FCY1YPR062W 477 nt7.69□□□□□ -1.18
TRM9P49957 RIM2YBR192W 1134 nt7.69□□□□□ -1.18
TRM9P49957 SGA1YIL099W 1650 nt7.69□□□□□ -1.18
TRM9P49957 GID8YMR135C 1368 nt7.69□□□□□ -1.18
TRM9P49957 KRR1YCL059C 951 nt7.68□□□□□ -1.18
TRM9P49957 MRP1YDR347W 966 nt7.68□□□□□ -1.18
TRM9P49957 HIS2YFR025C 1008 nt7.68□□□□□ -1.18
TRM9P49957 EMC3YKL207W 762 nt7.68□□□□□ -1.18
TRM9P49957 CYT1YOR065W 930 nt7.68□□□□□ -1.18
TRM9P49957 YMR166CYMR166C 1107 nt7.67□□□□□ -1.18
TRM9P49957 SNX3YOR357C 489 nt7.67□□□□□ -1.18
TRM9P49957 MTO1YGL236C 2010 nt7.66□□□□□ -1.18
TRM9P49957 CWP2YKL096W-A 279 nt7.65□□□□□ -1.18
TRM9P49957 LSR1LSR1 1175 nt7.65□□□□□ -1.18
TRM9P49957 MRS6YOR370C 1812 nt7.64□□□□□ -1.19
TRM9P49957 KGD2YDR148C 1392 nt7.64□□□□□ -1.19
TRM9P49957 YKL133CYKL133C 1392 nt7.64□□□□□ -1.19
TRM9P49957 YMR210WYMR210W 1350 nt7.64□□□□□ -1.19
TRM9P49957 RPD3YNL330C 1302 nt7.64□□□□□ -1.19
TRM9P49957 RSM7YJR113C 744 nt7.64□□□□□ -1.19
TRM9P49957 EDC2YER035W 438 nt7.63□□□□□ -1.19
TRM9P49957 YOR268CYOR268C 399 nt7.62□□□□□ -1.19
TRM9P49957 GAS1YMR307W 1680 nt7.62□□□□□ -1.19
TRM9P49957 SBP1YHL034C 885 nt7.61□□□□□ -1.19
TRM9P49957 YER156CYER156C 1017 nt7.6□□□□□ -1.19
TRM9P49957 RRT14YIL127C 621 nt7.6□□□□□ -1.19
TRM9P49957 YOR072WYOR072W 315 nt7.6□□□□□ -1.19
TRM9P49957 GDH1YOR375C 1365 nt7.59□□□□□ -1.19
TRM9P49957 PTC6YCR079W 1329 nt7.59□□□□□ -1.19
TRM9P49957 UGP1YKL035W 1500 nt7.59□□□□□ -1.19
TRM9P49957 LSP1YPL004C 1026 nt7.59□□□□□ -1.19
TRM9P49957 ADA2YDR448W 1305 nt7.58□□□□□ -1.2
TRM9P49957 SSL2YIL143C 2532 nt7.57□□□□□ -1.2
TRM9P49957 PET18YCR020C 648 nt7.56□□□□□ -1.2
TRM9P49957 TAD2YJL035C 753 nt7.55□□□□□ -1.2
TRM9P49957 YLR460CYLR460C 1131 nt7.55□□□□□ -1.2
TRM9P49957 MFT1YML062C 1179 nt7.55□□□□□ -1.2
TRM9P49957 RPC31YNL151C 756 nt7.55□□□□□ -1.2
TRM9P49957 MFG1YDL233W 1377 nt7.55□□□□□ -1.2
TRM9P49957 HEM14YER014W 1620 nt7.55□□□□□ -1.2
TRM9P49957 CAK1YFL029C 1107 nt7.54□□□□□ -1.2
TRM9P49957 OCH1YGL038C 1443 nt7.53□□□□□ -1.2
TRM9P49957 TPN1YGL186C 1740 nt7.53□□□□□ -1.2
TRM9P49957 tL(UAA)B1tL(UAA)B1 84 nt7.53□□□□□ -1.2
TRM9P49957 tL(UAA)B2tL(UAA)B2 84 nt7.53□□□□□ -1.2
TRM9P49957 tL(UAA)DtL(UAA)D 84 nt7.53□□□□□ -1.2
TRM9P49957 SUP51tL(UAA)J 84 nt7.53□□□□□ -1.2
TRM9P49957 tL(UAA)KtL(UAA)K 84 nt7.53□□□□□ -1.2
TRM9P49957 tL(UAA)LtL(UAA)L 84 nt7.53□□□□□ -1.2
TRM9P49957 tL(UAA)NtL(UAA)N 84 nt7.53□□□□□ -1.2
TRM9P49957 CHS7YHR142W 951 nt7.53□□□□□ -1.2
TRM9P49957 YMR316C-BYMR316C-B 309 nt7.53□□□□□ -1.2
TRM9P49957 DMA2YNL116W 1569 nt7.52□□□□□ -1.21
TRM9P49957 MET22YOL064C 1074 nt7.52□□□□□ -1.21
TRM9P49957 MDL2YPL270W 2322 nt7.52□□□□□ -1.21
TRM9P49957 TOM71YHR117W 1920 nt7.52□□□□□ -1.21
TRM9P49957 PDC6YGR087C 1692 nt7.51□□□□□ -1.21
TRM9P49957 DPL1YDR294C 1770 nt7.51□□□□□ -1.21
TRM9P49957 ELP4YPL101W 1371 nt7.5□□□□□ -1.21
TRM9P49957 UTR5YEL035C 501 nt7.5□□□□□ -1.21
TRM9P49957 MCM5YLR274W 2328 nt7.5□□□□□ -1.21
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms