Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
RFX5P48382 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
RFX5P48382 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
RFX5P48382 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
RFX5P48382 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
RFX5P48382 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
RFX5P48382 LINC00273-201ENST00000539813 1452 ntBASIC32.32■■■□□ 2.76
RFX5P48382 LINC01971-201ENST00000617888 1048 ntBASIC32.32■■■□□ 2.76
RFX5P48382 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC32.3■■■□□ 2.76
RFX5P48382 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC32.3■■■□□ 2.76
RFX5P48382 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
RFX5P48382 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC32.27■■■□□ 2.76
RFX5P48382 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC32.27■■■□□ 2.76
RFX5P48382 DUX4L11-201ENST00000611504 1267 ntBASIC32.26■■■□□ 2.75
RFX5P48382 DUX4L12-201ENST00000614593 1267 ntBASIC32.26■■■□□ 2.75
RFX5P48382 DUX4L14-201ENST00000621227 1267 ntBASIC32.26■■■□□ 2.75
RFX5P48382 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC32.25■■■□□ 2.75
RFX5P48382 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC32.24■■■□□ 2.75
RFX5P48382 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC32.24■■■□□ 2.75
RFX5P48382 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC32.23■■■□□ 2.75
RFX5P48382 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
RFX5P48382 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
RFX5P48382 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC32.22■■■□□ 2.75
RFX5P48382 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
RFX5P48382 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC32.22■■■□□ 2.75
RFX5P48382 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
RFX5P48382 RNF166-209ENST00000567844 633 ntTSL 5 BASIC32.21■■■□□ 2.75
RFX5P48382 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC32.21■■■□□ 2.75
RFX5P48382 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
RFX5P48382 MACF1-219ENST00000484793 834 ntTSL 2 BASIC32.2■■■□□ 2.75
RFX5P48382 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
RFX5P48382 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.74
RFX5P48382 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
RFX5P48382 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
RFX5P48382 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
RFX5P48382 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC32.18■■■□□ 2.74
RFX5P48382 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
RFX5P48382 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
RFX5P48382 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
RFX5P48382 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC32.17■■■□□ 2.74
RFX5P48382 CR559946.2-201ENST00000623684 991 ntBASIC32.17■■■□□ 2.74
RFX5P48382 AC135983.2-203ENST00000454486 1613 ntBASIC32.17■■■□□ 2.74
RFX5P48382 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
RFX5P48382 MIR3648-2-201ENST00000581792 180 ntBASIC32.16■■■□□ 2.74
RFX5P48382 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC32.16■■■□□ 2.74
RFX5P48382 MIR3648-1-201ENST00000615959 180 ntBASIC32.16■■■□□ 2.74
RFX5P48382 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC32.15■■■□□ 2.74
RFX5P48382 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC32.15■■■□□ 2.74
RFX5P48382 RPS2-202ENST00000526522 924 ntTSL 2 BASIC32.15■■■□□ 2.74
RFX5P48382 MBP-237ENST00000579129 1052 ntTSL 5 BASIC32.15■■■□□ 2.74
RFX5P48382 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
RFX5P48382 ABCB10P1-201ENST00000614297 2181 ntBASIC32.15■■■□□ 2.74
RFX5P48382 WHAMMP2-203ENST00000563942 1603 ntBASIC32.15■■■□□ 2.74
RFX5P48382 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC32.14■■■□□ 2.74
RFX5P48382 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC32.13■■■□□ 2.73
RFX5P48382 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC32.13■■■□□ 2.73
RFX5P48382 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC32.12■■■□□ 2.73
RFX5P48382 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
RFX5P48382 DUX4L13-201ENST00000554103 1267 ntBASIC32.12■■■□□ 2.73
RFX5P48382 DUX4L15-201ENST00000611059 1267 ntBASIC32.12■■■□□ 2.73
RFX5P48382 DUX4L23-201ENST00000615195 1269 ntBASIC32.12■■■□□ 2.73
RFX5P48382 DUX4L24-201ENST00000617576 1269 ntBASIC32.12■■■□□ 2.73
RFX5P48382 DUX4L22-201ENST00000618238 1269 ntBASIC32.12■■■□□ 2.73
RFX5P48382 DUX4L20-201ENST00000619712 1269 ntBASIC32.12■■■□□ 2.73
RFX5P48382 DUX4L21-201ENST00000622058 1269 ntBASIC32.12■■■□□ 2.73
RFX5P48382 DUX4L10-201ENST00000622460 1267 ntBASIC32.12■■■□□ 2.73
RFX5P48382 DUX4L25-201ENST00000624915 1269 ntBASIC32.12■■■□□ 2.73
RFX5P48382 GDI1-215ENST00000630693 786 ntTSL 4 BASIC32.12■■■□□ 2.73
RFX5P48382 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
RFX5P48382 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC32.11■■■□□ 2.73
RFX5P48382 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC32.11■■■□□ 2.73
RFX5P48382 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC32.11■■■□□ 2.73
RFX5P48382 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
RFX5P48382 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC32.1■■■□□ 2.73
RFX5P48382 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC32.1■■■□□ 2.73
RFX5P48382 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
RFX5P48382 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
RFX5P48382 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
RFX5P48382 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RFX5P48382 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RFX5P48382 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC32.09■■■□□ 2.73
RFX5P48382 AC016575.1-201ENST00000607026 382 ntBASIC32.09■■■□□ 2.73
RFX5P48382 CHML-204ENST00000638121 920 ntTSL 2 BASIC32.09■■■□□ 2.73
RFX5P48382 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC32.09■■■□□ 2.73
RFX5P48382 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
RFX5P48382 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
RFX5P48382 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
RFX5P48382 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
RFX5P48382 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC32.07■■■□□ 2.72
RFX5P48382 HLA-V-202ENST00000446817 847 ntBASIC32.07■■■□□ 2.72
RFX5P48382 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
RFX5P48382 AGPS-202ENST00000409888 815 ntTSL 4 BASIC32.06■■■□□ 2.72
RFX5P48382 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
RFX5P48382 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC32.06■■■□□ 2.72
RFX5P48382 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RFX5P48382 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC32.05■■■□□ 2.72
RFX5P48382 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RFX5P48382 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
RFX5P48382 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
RFX5P48382 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC32.03■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms