Protein–RNA interactions for Protein: P40486

SHQ1, Protein SHQ1, yeastyeast

Predicted RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHQ1P40486 SRP54YPR088C 1626 nt9.04□□□□□ -0.96
SHQ1P40486 ALD5YER073W 1563 nt9.03□□□□□ -0.96
SHQ1P40486 AAT1YKL106W 1356 nt9.03□□□□□ -0.96
SHQ1P40486 SPE2YOL052C 1191 nt9.03□□□□□ -0.96
SHQ1P40486 YMC2YBR104W 990 nt9.03□□□□□ -0.96
SHQ1P40486 HXK1YFR053C 1458 nt9.02□□□□□ -0.97
SHQ1P40486 THI6YPL214C 1623 nt9.02□□□□□ -0.97
SHQ1P40486 tD(GUC)BtD(GUC)B 72 nt9.01□□□□□ -0.97
SHQ1P40486 tD(GUC)DtD(GUC)D 72 nt9.01□□□□□ -0.97
SHQ1P40486 tD(GUC)G1tD(GUC)G1 72 nt9.01□□□□□ -0.97
SHQ1P40486 tD(GUC)G2tD(GUC)G2 72 nt9.01□□□□□ -0.97
SHQ1P40486 tD(GUC)I1tD(GUC)I1 72 nt9.01□□□□□ -0.97
SHQ1P40486 tD(GUC)I2tD(GUC)I2 72 nt9.01□□□□□ -0.97
SHQ1P40486 tD(GUC)J1tD(GUC)J1 72 nt9.01□□□□□ -0.97
SHQ1P40486 tD(GUC)J2tD(GUC)J2 72 nt9.01□□□□□ -0.97
SHQ1P40486 tD(GUC)J3tD(GUC)J3 72 nt9.01□□□□□ -0.97
SHQ1P40486 tD(GUC)J4tD(GUC)J4 72 nt9.01□□□□□ -0.97
SHQ1P40486 tD(GUC)KtD(GUC)K 72 nt9.01□□□□□ -0.97
SHQ1P40486 tD(GUC)L1tD(GUC)L1 72 nt9.01□□□□□ -0.97
SHQ1P40486 tD(GUC)L2tD(GUC)L2 72 nt9.01□□□□□ -0.97
SHQ1P40486 tD(GUC)MtD(GUC)M 72 nt9.01□□□□□ -0.97
SHQ1P40486 tD(GUC)OtD(GUC)O 72 nt9.01□□□□□ -0.97
SHQ1P40486 NAS2YIL007C 663 nt9.01□□□□□ -0.97
SHQ1P40486 REX2YLR059C 810 nt9□□□□□ -0.97
SHQ1P40486 YOR072WYOR072W 315 nt9□□□□□ -0.97
SHQ1P40486 HMG2YLR450W 3138 nt9□□□□□ -0.97
SHQ1P40486 YCP4YCR004C 744 nt8.99□□□□□ -0.97
SHQ1P40486 HXT11YOL156W 1704 nt8.99□□□□□ -0.97
SHQ1P40486 RIB1YBL033C 1038 nt8.98□□□□□ -0.97
SHQ1P40486 IPL1YPL209C 1104 nt8.98□□□□□ -0.97
SHQ1P40486 YRF1-2YER190W 5046 nt8.98□□□□□ -0.97
SHQ1P40486 YCR025CYCR025C 411 nt8.97□□□□□ -0.97
SHQ1P40486 YIA6YIL006W 1122 nt8.97□□□□□ -0.97
SHQ1P40486 EMC3YKL207W 762 nt8.97□□□□□ -0.97
SHQ1P40486 PTC6YCR079W 1329 nt8.97□□□□□ -0.97
SHQ1P40486 GAS1YMR307W 1680 nt8.97□□□□□ -0.97
SHQ1P40486 CDD1YLR245C 429 nt8.96□□□□□ -0.98
SHQ1P40486 FSH2YMR222C 672 nt8.96□□□□□ -0.98
SHQ1P40486 THP3YPR045C 1413 nt8.96□□□□□ -0.98
SHQ1P40486 tA(AGC)DtA(AGC)D 73 nt8.95□□□□□ -0.98
SHQ1P40486 tA(AGC)FtA(AGC)F 73 nt8.95□□□□□ -0.98
SHQ1P40486 tA(AGC)GtA(AGC)G 73 nt8.95□□□□□ -0.98
SHQ1P40486 tA(AGC)HtA(AGC)H 73 nt8.95□□□□□ -0.98
SHQ1P40486 tA(AGC)JtA(AGC)J 73 nt8.95□□□□□ -0.98
SHQ1P40486 tA(AGC)K1tA(AGC)K1 73 nt8.95□□□□□ -0.98
SHQ1P40486 tA(AGC)K2tA(AGC)K2 73 nt8.95□□□□□ -0.98
SHQ1P40486 tA(AGC)LtA(AGC)L 73 nt8.95□□□□□ -0.98
SHQ1P40486 tA(AGC)M1tA(AGC)M1 73 nt8.95□□□□□ -0.98
SHQ1P40486 tA(AGC)M2tA(AGC)M2 73 nt8.95□□□□□ -0.98
SHQ1P40486 tA(AGC)PtA(AGC)P 73 nt8.95□□□□□ -0.98
SHQ1P40486 MIM1YOL026C 342 nt8.95□□□□□ -0.98
SHQ1P40486 ILV2YMR108W 2064 nt8.94□□□□□ -0.98
SHQ1P40486 MRS4YKR052C 915 nt8.94□□□□□ -0.98
SHQ1P40486 SRM1YGL097W 1449 nt8.94□□□□□ -0.98
SHQ1P40486 MEX67YPL169C 1800 nt8.92□□□□□ -0.98
SHQ1P40486 AAC3YBR085W 924 nt8.92□□□□□ -0.98
SHQ1P40486 YLR072WYLR072W 2082 nt8.92□□□□□ -0.98
SHQ1P40486 TPN1YGL186C 1740 nt8.91□□□□□ -0.98
SHQ1P40486 YKR012CYKR012C 378 nt8.91□□□□□ -0.98
SHQ1P40486 HBS1YKR084C 1836 nt8.9□□□□□ -0.98
SHQ1P40486 SOD2YHR008C 702 nt8.9□□□□□ -0.98
SHQ1P40486 SAM50YNL026W 1455 nt8.89□□□□□ -0.99
SHQ1P40486 snR86snR86 1004 nt8.89□□□□□ -0.99
SHQ1P40486 FLX1YIL134W 936 nt8.89□□□□□ -0.99
SHQ1P40486 DTR1YBR180W 1719 nt8.88□□□□□ -0.99
SHQ1P40486 YPT11YNL304W 1254 nt8.87□□□□□ -0.99
SHQ1P40486 SDS24YBR214W 1584 nt8.86□□□□□ -0.99
SHQ1P40486 DUR3YHL016C 2208 nt8.86□□□□□ -0.99
SHQ1P40486 VBA3YCL069W 1377 nt8.86□□□□□ -0.99
SHQ1P40486 FTH1YBR207W 1398 nt8.86□□□□□ -0.99
SHQ1P40486 PHB2YGR231C 933 nt8.85□□□□□ -0.99
SHQ1P40486 CYC3YAL039C 810 nt8.85□□□□□ -0.99
SHQ1P40486 ERG6YML008C 1152 nt8.85□□□□□ -0.99
SHQ1P40486 ADH3YMR083W 1128 nt8.85□□□□□ -0.99
SHQ1P40486 TMS1YDR105C 1422 nt8.85□□□□□ -0.99
SHQ1P40486 RFC1YOR217W 2586 nt8.84□□□□□ -0.99
SHQ1P40486 MOB1YIL106W 945 nt8.84□□□□□ -0.99
SHQ1P40486 ORT1YOR130C 879 nt8.84□□□□□ -0.99
SHQ1P40486 YMR210WYMR210W 1350 nt8.84□□□□□ -0.99
SHQ1P40486 GTB1YDR221W 2109 nt8.83□□□□□ -1
SHQ1P40486 LEA1YPL213W 717 nt8.81□□□□□ -1
SHQ1P40486 ABP1YCR088W 1779 nt8.81□□□□□ -1
SHQ1P40486 URA8YJR103W 1737 nt8.8□□□□□ -1
SHQ1P40486 YJL009WYJL009W 327 nt8.8□□□□□ -1
SHQ1P40486 YMR007WYMR007W 381 nt8.8□□□□□ -1
SHQ1P40486 RCR1YBR005W 642 nt8.8□□□□□ -1
SHQ1P40486 snR4snR4 186 nt8.8□□□□□ -1
SHQ1P40486 MEP1YGR121C 1479 nt8.8□□□□□ -1
SHQ1P40486 LYS20YDL182W 1287 nt8.79□□□□□ -1
SHQ1P40486 SER2YGR208W 930 nt8.79□□□□□ -1
SHQ1P40486 SWM1YDR260C 513 nt8.78□□□□□ -1
SHQ1P40486 HTS1YPR033C 1641 nt8.77□□□□□ -1.01
SHQ1P40486 YBR056WYBR056W 1506 nt8.77□□□□□ -1.01
SHQ1P40486 YJR149WYJR149W 1215 nt8.77□□□□□ -1.01
SHQ1P40486 ENO1YGR254W 1314 nt8.77□□□□□ -1.01
SHQ1P40486 RSM7YJR113C 744 nt8.75□□□□□ -1.01
SHQ1P40486 SRP102YKL154W 735 nt8.75□□□□□ -1.01
SHQ1P40486 HIS3YOR202W 663 nt8.75□□□□□ -1.01
SHQ1P40486 POP2YNR052C 1302 nt8.75□□□□□ -1.01
SHQ1P40486 YFR020WYFR020W 699 nt8.74□□□□□ -1.01
Retrieved 100 of 7,029 protein–RNA pairs in 45.9 ms