Protein–RNA interactions for Protein: P38931

SSN2, Mediator of RNA polymerase II transcription subunit 13, yeastyeast

Predictions only

Length 1,420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN2P38931 YPL108WYPL108W 507 nt14.44□□□□□ -0.1
SSN2P38931 YMR210WYMR210W 1350 nt14.42□□□□□ -0.1
SSN2P38931 SAN1YDR143C 1833 nt14.41□□□□□ -0.1
SSN2P38931 UTR5YEL035C 501 nt14.41□□□□□ -0.1
SSN2P38931 UME6YDR207C 2511 nt14.39□□□□□ -0.11
SSN2P38931 YOR343CYOR343C 327 nt14.38□□□□□ -0.11
SSN2P38931 KGD2YDR148C 1392 nt14.38□□□□□ -0.11
SSN2P38931 HOL1YNR055C 1761 nt14.38□□□□□ -0.11
SSN2P38931 SNX3YOR357C 489 nt14.36□□□□□ -0.11
SSN2P38931 snR31snR31 225 nt14.35□□□□□ -0.11
SSN2P38931 SGA1YIL099W 1650 nt14.35□□□□□ -0.11
SSN2P38931 LSP1YPL004C 1026 nt14.34□□□□□ -0.11
SSN2P38931 tL(UAA)B1tL(UAA)B1 84 nt14.31□□□□□ -0.12
SSN2P38931 tL(UAA)B2tL(UAA)B2 84 nt14.31□□□□□ -0.12
SSN2P38931 tL(UAA)DtL(UAA)D 84 nt14.31□□□□□ -0.12
SSN2P38931 SUP51tL(UAA)J 84 nt14.31□□□□□ -0.12
SSN2P38931 tL(UAA)KtL(UAA)K 84 nt14.31□□□□□ -0.12
SSN2P38931 tL(UAA)LtL(UAA)L 84 nt14.31□□□□□ -0.12
SSN2P38931 tL(UAA)NtL(UAA)N 84 nt14.31□□□□□ -0.12
SSN2P38931 CMP2YML057W 1815 nt14.3□□□□□ -0.12
SSN2P38931 PTC6YCR079W 1329 nt14.3□□□□□ -0.12
SSN2P38931 RPN14YGL004C 1254 nt14.27□□□□□ -0.12
SSN2P38931 YJR149WYJR149W 1215 nt14.26□□□□□ -0.13
SSN2P38931 HRA1HRA1 564 nt14.25□□□□□ -0.13
SSN2P38931 YAL016C-AYAL016C-A 315 nt14.24□□□□□ -0.13
SSN2P38931 UGP1YKL035W 1500 nt14.23□□□□□ -0.13
SSN2P38931 YMR166CYMR166C 1107 nt14.23□□□□□ -0.13
SSN2P38931 YFR020WYFR020W 699 nt14.22□□□□□ -0.13
SSN2P38931 RPD3YNL330C 1302 nt14.21□□□□□ -0.13
SSN2P38931 GAS1YMR307W 1680 nt14.21□□□□□ -0.14
SSN2P38931 ELP4YPL101W 1371 nt14.2□□□□□ -0.14
SSN2P38931 ZAP1YJL056C 2643 nt14.2□□□□□ -0.14
SSN2P38931 YPT11YNL304W 1254 nt14.2□□□□□ -0.14
SSN2P38931 RPL12BYDR418W 498 nt14.19□□□□□ -0.14
SSN2P38931 ADA2YDR448W 1305 nt14.16□□□□□ -0.14
SSN2P38931 SBP1YHL034C 885 nt14.15□□□□□ -0.14
SSN2P38931 RSM7YJR113C 744 nt14.14□□□□□ -0.15
SSN2P38931 RPS6AYPL090C 711 nt14.13□□□□□ -0.15
SSN2P38931 RPS6BYBR181C 711 nt14.13□□□□□ -0.15
SSN2P38931 TOS1YBR162C 1368 nt14.1□□□□□ -0.15
SSN2P38931 MRP1YDR347W 966 nt14.08□□□□□ -0.15
SSN2P38931 CAK1YFL029C 1107 nt14.07□□□□□ -0.16
SSN2P38931 RPC31YNL151C 756 nt14.07□□□□□ -0.16
SSN2P38931 SSL2YIL143C 2532 nt14.06□□□□□ -0.16
SSN2P38931 BXI1YNL305C 894 nt14.05□□□□□ -0.16
SSN2P38931 ODC1YPL134C 933 nt14.05□□□□□ -0.16
SSN2P38931 OCH1YGL038C 1443 nt14.02□□□□□ -0.17
SSN2P38931 THI3YDL080C 1830 nt14.01□□□□□ -0.17
SSN2P38931 MFT1YML062C 1179 nt14□□□□□ -0.17
SSN2P38931 GDH1YOR375C 1365 nt13.99□□□□□ -0.17
SSN2P38931 YOR268CYOR268C 399 nt13.98□□□□□ -0.17
SSN2P38931 HIS2YFR025C 1008 nt13.98□□□□□ -0.17
SSN2P38931 DPL1YDR294C 1770 nt13.97□□□□□ -0.17
SSN2P38931 MFG1YDL233W 1377 nt13.97□□□□□ -0.17
SSN2P38931 YMR206WYMR206W 942 nt13.97□□□□□ -0.17
SSN2P38931 MET22YOL064C 1074 nt13.97□□□□□ -0.17
SSN2P38931 EDC2YER035W 438 nt13.96□□□□□ -0.18
SSN2P38931 ADE1YAR015W 921 nt13.96□□□□□ -0.18
SSN2P38931 YLR460CYLR460C 1131 nt13.94□□□□□ -0.18
SSN2P38931 YER156CYER156C 1017 nt13.93□□□□□ -0.18
SSN2P38931 YIL168WYIL168W 384 nt13.92□□□□□ -0.18
SSN2P38931 YMR316C-BYMR316C-B 309 nt13.92□□□□□ -0.18
SSN2P38931 BAP3YDR046C 1815 nt13.91□□□□□ -0.18
SSN2P38931 GGA2YHR108W 1758 nt13.91□□□□□ -0.18
SSN2P38931 YDR467CYDR467C 327 nt13.91□□□□□ -0.18
SSN2P38931 GPM1YKL152C 744 nt13.91□□□□□ -0.18
SSN2P38931 SHC1YER096W 1539 nt13.91□□□□□ -0.18
SSN2P38931 CHS7YHR142W 951 nt13.9□□□□□ -0.18
SSN2P38931 TAD2YJL035C 753 nt13.9□□□□□ -0.19
SSN2P38931 RNA170RNA170 169 nt13.9□□□□□ -0.19
SSN2P38931 RRT14YIL127C 621 nt13.88□□□□□ -0.19
SSN2P38931 YJL043WYJL043W 774 nt13.86□□□□□ -0.19
SSN2P38931 CWP2YKL096W-A 279 nt13.86□□□□□ -0.19
SSN2P38931 YPR084WYPR084W 1371 nt13.86□□□□□ -0.19
SSN2P38931 RHO1YPR165W 630 nt13.85□□□□□ -0.19
SSN2P38931 LEU4YNL104C 1860 nt13.85□□□□□ -0.19
SSN2P38931 TDH1YJL052W 999 nt13.83□□□□□ -0.2
SSN2P38931 PRE5YMR314W 705 nt13.82□□□□□ -0.2
SSN2P38931 PET494YNR045W 1470 nt13.81□□□□□ -0.2
SSN2P38931 NCA3YJL116C 1014 nt13.81□□□□□ -0.2
SSN2P38931 SDH8YBR269C 417 nt13.81□□□□□ -0.2
SSN2P38931 PDC6YGR087C 1692 nt13.81□□□□□ -0.2
SSN2P38931 HOG1YLR113W 1308 nt13.8□□□□□ -0.2
SSN2P38931 THI73YLR004C 1572 nt13.79□□□□□ -0.2
SSN2P38931 OLA1YBR025C 1185 nt13.79□□□□□ -0.2
SSN2P38931 YPL247CYPL247C 1572 nt13.77□□□□□ -0.21
SSN2P38931 YMR209CYMR209C 1374 nt13.76□□□□□ -0.21
SSN2P38931 NUP53YMR153W 1428 nt13.75□□□□□ -0.21
SSN2P38931 tE(CUC)DtE(CUC)D 72 nt13.74□□□□□ -0.21
SSN2P38931 tE(CUC)ItE(CUC)I 72 nt13.74□□□□□ -0.21
SSN2P38931 YJL009WYJL009W 327 nt13.74□□□□□ -0.21
SSN2P38931 FUS3YBL016W 1062 nt13.74□□□□□ -0.21
SSN2P38931 MEP1YGR121C 1479 nt13.74□□□□□ -0.21
SSN2P38931 YPT31YER031C 672 nt13.73□□□□□ -0.21
SSN2P38931 MDM35YKL053C-A 261 nt13.73□□□□□ -0.21
SSN2P38931 HAC1YFL031W 717 nt13.72□□□□□ -0.21
SSN2P38931 YBL095WYBL095W 813 nt13.72□□□□□ -0.21
SSN2P38931 YMC2YBR104W 990 nt13.71□□□□□ -0.22
SSN2P38931 RRT6YGL146C 936 nt13.7□□□□□ -0.22
SSN2P38931 AAC3YBR085W 924 nt13.7□□□□□ -0.22
Retrieved 100 of 7,029 protein–RNA pairs in 34.8 ms