Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 FIT1YDR534C 1587 nt7.42□□□□□ -1.22
SSH1P38353 KGD2YDR148C 1392 nt7.41□□□□□ -1.22
SSH1P38353 NPP2YEL016C 1482 nt7.41□□□□□ -1.22
SSH1P38353 MET30YIL046W 1923 nt7.4□□□□□ -1.22
SSH1P38353 YKL053WYKL053W 375 nt7.4□□□□□ -1.22
SSH1P38353 GPM1YKL152C 744 nt7.4□□□□□ -1.22
SSH1P38353 NDE1YMR145C 1683 nt7.4□□□□□ -1.23
SSH1P38353 YDR510C-AYDR510C-A 117 nt7.39□□□□□ -1.23
SSH1P38353 YIL177CYIL177C 5277 nt7.38□□□□□ -1.23
SSH1P38353 TPC1YGR096W 945 nt7.38□□□□□ -1.23
SSH1P38353 YBL095WYBL095W 813 nt7.38□□□□□ -1.23
SSH1P38353 LEU2YCL018W 1095 nt7.38□□□□□ -1.23
SSH1P38353 SAN1YDR143C 1833 nt7.38□□□□□ -1.23
SSH1P38353 CCR4YAL021C 2514 nt7.37□□□□□ -1.23
SSH1P38353 YNL190WYNL190W 615 nt7.37□□□□□ -1.23
SSH1P38353 STE4YOR212W 1272 nt7.37□□□□□ -1.23
SSH1P38353 GGA2YHR108W 1758 nt7.36□□□□□ -1.23
SSH1P38353 SBP1YHL034C 885 nt7.36□□□□□ -1.23
SSH1P38353 GSF2YML048W 1212 nt7.36□□□□□ -1.23
SSH1P38353 THI3YDL080C 1830 nt7.36□□□□□ -1.23
SSH1P38353 FET5YFL041W 1869 nt7.35□□□□□ -1.23
SSH1P38353 YMR316C-BYMR316C-B 309 nt7.35□□□□□ -1.23
SSH1P38353 TUB4YLR212C 1422 nt7.35□□□□□ -1.23
SSH1P38353 NIF3YGL221C 867 nt7.34□□□□□ -1.23
SSH1P38353 YLR349WYLR349W 507 nt7.34□□□□□ -1.23
SSH1P38353 NAM8YHR086W 1572 nt7.33□□□□□ -1.24
SSH1P38353 CPD1YGR247W 720 nt7.33□□□□□ -1.24
SSH1P38353 LAS17YOR181W 1902 nt7.33□□□□□ -1.24
SSH1P38353 PMA2YPL036W 2844 nt7.33□□□□□ -1.24
SSH1P38353 FRT1YOR324C 1809 nt7.32□□□□□ -1.24
SSH1P38353 SRP54YPR088C 1626 nt7.32□□□□□ -1.24
SSH1P38353 STF1YDL130W-A 261 nt7.32□□□□□ -1.24
SSH1P38353 YMC2YBR104W 990 nt7.31□□□□□ -1.24
SSH1P38353 BEM1YBR200W 1656 nt7.31□□□□□ -1.24
SSH1P38353 GUT1YHL032C 2130 nt7.3□□□□□ -1.24
SSH1P38353 APS2YJR058C 444 nt7.3□□□□□ -1.24
SSH1P38353 REX2YLR059C 810 nt7.3□□□□□ -1.24
SSH1P38353 AAT1YKL106W 1356 nt7.29□□□□□ -1.24
SSH1P38353 tD(GUC)BtD(GUC)B 72 nt7.28□□□□□ -1.24
SSH1P38353 tD(GUC)DtD(GUC)D 72 nt7.28□□□□□ -1.24
SSH1P38353 tD(GUC)G1tD(GUC)G1 72 nt7.28□□□□□ -1.24
SSH1P38353 tD(GUC)G2tD(GUC)G2 72 nt7.28□□□□□ -1.24
SSH1P38353 tD(GUC)I1tD(GUC)I1 72 nt7.28□□□□□ -1.24
SSH1P38353 tD(GUC)I2tD(GUC)I2 72 nt7.28□□□□□ -1.24
SSH1P38353 tD(GUC)J1tD(GUC)J1 72 nt7.28□□□□□ -1.24
SSH1P38353 tD(GUC)J2tD(GUC)J2 72 nt7.28□□□□□ -1.24
SSH1P38353 tD(GUC)J3tD(GUC)J3 72 nt7.28□□□□□ -1.24
SSH1P38353 tD(GUC)J4tD(GUC)J4 72 nt7.28□□□□□ -1.24
SSH1P38353 tD(GUC)KtD(GUC)K 72 nt7.28□□□□□ -1.24
SSH1P38353 tD(GUC)L1tD(GUC)L1 72 nt7.28□□□□□ -1.24
SSH1P38353 tD(GUC)L2tD(GUC)L2 72 nt7.28□□□□□ -1.24
SSH1P38353 tD(GUC)MtD(GUC)M 72 nt7.28□□□□□ -1.24
SSH1P38353 tD(GUC)OtD(GUC)O 72 nt7.28□□□□□ -1.24
SSH1P38353 FSH2YMR222C 672 nt7.28□□□□□ -1.24
SSH1P38353 GAS1YMR307W 1680 nt7.28□□□□□ -1.24
SSH1P38353 TRP2YER090W 1524 nt7.27□□□□□ -1.25
SSH1P38353 MRS4YKR052C 915 nt7.27□□□□□ -1.25
SSH1P38353 YPT11YNL304W 1254 nt7.27□□□□□ -1.25
SSH1P38353 SPE2YOL052C 1191 nt7.27□□□□□ -1.25
SSH1P38353 HXT11YOL156W 1704 nt7.27□□□□□ -1.25
SSH1P38353 YDR306CYDR306C 1437 nt7.27□□□□□ -1.25
SSH1P38353 THP3YPR045C 1413 nt7.27□□□□□ -1.25
SSH1P38353 KRE1YNL322C 942 nt7.26□□□□□ -1.25
SSH1P38353 AAC3YBR085W 924 nt7.26□□□□□ -1.25
SSH1P38353 PTC6YCR079W 1329 nt7.26□□□□□ -1.25
SSH1P38353 NAS2YIL007C 663 nt7.25□□□□□ -1.25
SSH1P38353 EMC3YKL207W 762 nt7.25□□□□□ -1.25
SSH1P38353 MIM1YOL026C 342 nt7.25□□□□□ -1.25
SSH1P38353 HBS1YKR084C 1836 nt7.24□□□□□ -1.25
SSH1P38353 YJL045WYJL045W 1905 nt7.23□□□□□ -1.25
SSH1P38353 TMS1YDR105C 1422 nt7.22□□□□□ -1.25
SSH1P38353 ESS1YJR017C 513 nt7.22□□□□□ -1.25
SSH1P38353 YLR072WYLR072W 2082 nt7.21□□□□□ -1.25
SSH1P38353 ADH7YCR105W 1086 nt7.21□□□□□ -1.26
SSH1P38353 CDD1YLR245C 429 nt7.21□□□□□ -1.26
SSH1P38353 CTF3YLR381W 2202 nt7.2□□□□□ -1.26
SSH1P38353 GGC1YDL198C 903 nt7.2□□□□□ -1.26
SSH1P38353 YKR012CYKR012C 378 nt7.2□□□□□ -1.26
SSH1P38353 snR86snR86 1004 nt7.19□□□□□ -1.26
SSH1P38353 SDS24YBR214W 1584 nt7.19□□□□□ -1.26
SSH1P38353 RAD51YER095W 1203 nt7.18□□□□□ -1.26
SSH1P38353 PAU5YFL020C 369 nt7.18□□□□□ -1.26
SSH1P38353 STP3YLR375W 1032 nt7.18□□□□□ -1.26
SSH1P38353 ORT1YOR130C 879 nt7.18□□□□□ -1.26
SSH1P38353 YMR210WYMR210W 1350 nt7.18□□□□□ -1.26
SSH1P38353 SRM1YGL097W 1449 nt7.18□□□□□ -1.26
SSH1P38353 PAR32YDL173W 888 nt7.17□□□□□ -1.26
SSH1P38353 LYS20YDL182W 1287 nt7.17□□□□□ -1.26
SSH1P38353 IGD1YFR017C 588 nt7.17□□□□□ -1.26
SSH1P38353 PAU15YIR041W 375 nt7.17□□□□□ -1.26
SSH1P38353 VBA3YCL069W 1377 nt7.17□□□□□ -1.26
SSH1P38353 RSM7YJR113C 744 nt7.16□□□□□ -1.26
SSH1P38353 PGC1YPL206C 966 nt7.16□□□□□ -1.26
SSH1P38353 AFG2YLR397C 2343 nt7.15□□□□□ -1.26
SSH1P38353 PHB2YGR231C 933 nt7.14□□□□□ -1.27
SSH1P38353 YIL108WYIL108W 2091 nt7.14□□□□□ -1.27
SSH1P38353 YIR035CYIR035C 765 nt7.14□□□□□ -1.27
SSH1P38353 YJL009WYJL009W 327 nt7.14□□□□□ -1.27
SSH1P38353 ADH3YMR083W 1128 nt7.14□□□□□ -1.27
SSH1P38353 LEA1YPL213W 717 nt7.13□□□□□ -1.27
Retrieved 100 of 7,029 protein–RNA pairs in 118.6 ms