Protein–RNA interactions for Protein: P25339

PUF4, Pumilio homology domain family member 4, yeastyeast

Known RBP RIP-Chip data

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF4P25339 FAF1YIL019W 1041 nt8.93□□□□□ -0.98
PUF4P25339 SWT21YNL187W 1074 nt8.93□□□□□ -0.98
PUF4P25339 CRC1YOR100C 984 nt8.93□□□□□ -0.98
PUF4P25339 YTH1YPR107C 627 nt8.93□□□□□ -0.98 RIP-Chip
PUF4P25339 MET1YKR069W 1782 nt8.92□□□□□ -0.98
PUF4P25339 HXK1YFR053C 1458 nt8.91□□□□□ -0.98
PUF4P25339 LEU4YNL104C 1860 nt8.9□□□□□ -0.98
PUF4P25339 MHF1YOL086W-A 273 nt8.9□□□□□ -0.98
PUF4P25339 AGP3YFL055W 1677 nt8.9□□□□□ -0.98
PUF4P25339 YHL008CYHL008C 1884 nt8.89□□□□□ -0.99
PUF4P25339 MTO1YGL236C 2010 nt8.88□□□□□ -0.99
PUF4P25339 YKL053WYKL053W 375 nt8.88□□□□□ -0.99
PUF4P25339 TPN1YGL186C 1740 nt8.87□□□□□ -0.99
PUF4P25339 TOM71YHR117W 1920 nt8.87□□□□□ -0.99
PUF4P25339 BUR6YER159C 429 nt8.86□□□□□ -0.99
PUF4P25339 PCP1YGR101W 1041 nt8.86□□□□□ -0.99
PUF4P25339 NSG2YNL156C 900 nt8.86□□□□□ -0.99
PUF4P25339 RPN14YGL004C 1254 nt8.85□□□□□ -0.99
PUF4P25339 YNL067W-AYNL067W-A 147 nt8.85□□□□□ -0.99
PUF4P25339 AMF1YOR378W 1548 nt8.85□□□□□ -0.99
PUF4P25339 KRR1YCL059C 951 nt8.84□□□□□ -0.99
PUF4P25339 ALD5YER073W 1563 nt8.84□□□□□ -0.99
PUF4P25339 POT1YIL160C 1254 nt8.84□□□□□ -0.99
PUF4P25339 APS2YJR058C 444 nt8.84□□□□□ -0.99
PUF4P25339 KGD2YDR148C 1392 nt8.84□□□□□ -0.99
PUF4P25339 ENO2YHR174W 1314 nt8.83□□□□□ -1
PUF4P25339 NIF3YGL221C 867 nt8.83□□□□□ -1
PUF4P25339 TPC1YGR096W 945 nt8.83□□□□□ -1
PUF4P25339 PUS5YLR165C 765 nt8.83□□□□□ -1
PUF4P25339 TAF13YML098W 504 nt8.83□□□□□ -1
PUF4P25339 snR31snR31 225 nt8.81□□□□□ -1
PUF4P25339 NPP2YEL016C 1482 nt8.81□□□□□ -1
PUF4P25339 tE(CUC)DtE(CUC)D 72 nt8.8□□□□□ -1
PUF4P25339 tE(CUC)ItE(CUC)I 72 nt8.8□□□□□ -1
PUF4P25339 YDR467CYDR467C 327 nt8.8□□□□□ -1
PUF4P25339 FHN1YGR131W 525 nt8.8□□□□□ -1
PUF4P25339 POP2YNR052C 1302 nt8.8□□□□□ -1 RIP-Chip
PUF4P25339 SAN1YDR143C 1833 nt8.78□□□□□ -1
PUF4P25339 YHM2YMR241W 945 nt8.78□□□□□ -1 RIP-Chip
PUF4P25339 YLR173WYLR173W 1827 nt8.77□□□□□ -1
PUF4P25339 NAS2YIL007C 663 nt8.77□□□□□ -1.01
PUF4P25339 THI3YDL080C 1830 nt8.75□□□□□ -1.01
PUF4P25339 NAM8YHR086W 1572 nt8.75□□□□□ -1.01
PUF4P25339 TUB4YLR212C 1422 nt8.75□□□□□ -1.01
PUF4P25339 INH1YDL181W 258 nt8.75□□□□□ -1.01
PUF4P25339 BNS1YGR230W 414 nt8.75□□□□□ -1.01
PUF4P25339 GPM1YKL152C 744 nt8.75□□□□□ -1.01
PUF4P25339 CDD1YLR245C 429 nt8.75□□□□□ -1.01
PUF4P25339 FET5YFL041W 1869 nt8.74□□□□□ -1.01
PUF4P25339 PAR32YDL173W 888 nt8.74□□□□□ -1.01
PUF4P25339 NBA1YOL070C 1506 nt8.72□□□□□ -1.01
PUF4P25339 REC114YMR133W 1287 nt8.72□□□□□ -1.01
PUF4P25339 SPE2YOL052C 1191 nt8.72□□□□□ -1.01
PUF4P25339 LEU2YCL018W 1095 nt8.72□□□□□ -1.01
PUF4P25339 YER152W-AYER152W-A 567 nt8.71□□□□□ -1.02
PUF4P25339 THI6YPL214C 1623 nt8.7□□□□□ -1.02
PUF4P25339 ATG17YLR423C 1254 nt8.7□□□□□ -1.02
PUF4P25339 GSF2YML048W 1212 nt8.7□□□□□ -1.02
PUF4P25339 YMR316C-BYMR316C-B 309 nt8.7□□□□□ -1.02
PUF4P25339 KDX1YKL161C 1302 nt8.7□□□□□ -1.02
PUF4P25339 SRP54YPR088C 1626 nt8.69□□□□□ -1.02
PUF4P25339 RMA1YKL132C 1293 nt8.69□□□□□ -1.02
PUF4P25339 CBK1YNL161W 2271 nt8.69□□□□□ -1.02
PUF4P25339 SBP1YHL034C 885 nt8.68□□□□□ -1.02
PUF4P25339 RTG2YGL252C 1767 nt8.68□□□□□ -1.02
PUF4P25339 GGA2YHR108W 1758 nt8.67□□□□□ -1.02
PUF4P25339 REX2YLR059C 810 nt8.67□□□□□ -1.02
PUF4P25339 BUD20YLR074C 501 nt8.67□□□□□ -1.02
PUF4P25339 YBL095WYBL095W 813 nt8.67□□□□□ -1.02
PUF4P25339 ALR1YOL130W 2580 nt8.66□□□□□ -1.02
PUF4P25339 YCP4YCR004C 744 nt8.66□□□□□ -1.02
PUF4P25339 SRN2YLR119W 642 nt8.66□□□□□ -1.02
PUF4P25339 TRP2YER090W 1524 nt8.65□□□□□ -1.02
PUF4P25339 THP3YPR045C 1413 nt8.65□□□□□ -1.02
PUF4P25339 KRE1YNL322C 942 nt8.65□□□□□ -1.02
PUF4P25339 HMT1YBR034C 1047 nt8.65□□□□□ -1.02 RIP-Chip
PUF4P25339 AAT1YKL106W 1356 nt8.64□□□□□ -1.03
PUF4P25339 BMT5YIL096C 1011 nt8.64□□□□□ -1.03 RIP-Chip
PUF4P25339 PTC6YCR079W 1329 nt8.62□□□□□ -1.03
PUF4P25339 GAS1YMR307W 1680 nt8.62□□□□□ -1.03
PUF4P25339 YMC2YBR104W 990 nt8.61□□□□□ -1.03
PUF4P25339 GCD11YER025W 1584 nt8.61□□□□□ -1.03
PUF4P25339 HXT11YOL156W 1704 nt8.6□□□□□ -1.03 RIP-Chip
PUF4P25339 PHB2YGR231C 933 nt8.6□□□□□ -1.03
PUF4P25339 YIR018C-AYIR018C-A 138 nt8.6□□□□□ -1.03
PUF4P25339 YKR012CYKR012C 378 nt8.6□□□□□ -1.03
PUF4P25339 ADH3YMR083W 1128 nt8.6□□□□□ -1.03
PUF4P25339 GNP1YDR508C 1992 nt8.59□□□□□ -1.03
PUF4P25339 ATG22YCL038C 1587 nt8.58□□□□□ -1.04
PUF4P25339 tD(GUC)BtD(GUC)B 72 nt8.58□□□□□ -1.04
PUF4P25339 tD(GUC)DtD(GUC)D 72 nt8.58□□□□□ -1.04
PUF4P25339 tD(GUC)G1tD(GUC)G1 72 nt8.58□□□□□ -1.04
PUF4P25339 tD(GUC)G2tD(GUC)G2 72 nt8.58□□□□□ -1.04
PUF4P25339 tD(GUC)I1tD(GUC)I1 72 nt8.58□□□□□ -1.04
PUF4P25339 tD(GUC)I2tD(GUC)I2 72 nt8.58□□□□□ -1.04
PUF4P25339 tD(GUC)J1tD(GUC)J1 72 nt8.58□□□□□ -1.04
PUF4P25339 tD(GUC)J2tD(GUC)J2 72 nt8.58□□□□□ -1.04
PUF4P25339 tD(GUC)J3tD(GUC)J3 72 nt8.58□□□□□ -1.04
PUF4P25339 tD(GUC)J4tD(GUC)J4 72 nt8.58□□□□□ -1.04
PUF4P25339 tD(GUC)KtD(GUC)K 72 nt8.58□□□□□ -1.04
Retrieved 100 of 7,029 protein–RNA pairs in 27.8 ms