Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCCBP05166 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCCBP05166 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCCBP05166 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.82■■□□□ 1.72
PCCBP05166 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.82■■□□□ 1.72
PCCBP05166 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PCCBP05166 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PCCBP05166 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.82■■□□□ 1.72
PCCBP05166 LINC00273-201ENST00000539813 1452 ntBASIC25.81■■□□□ 1.72
PCCBP05166 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.8■■□□□ 1.72
PCCBP05166 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.8■■□□□ 1.72
PCCBP05166 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.8■■□□□ 1.72
PCCBP05166 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.8■■□□□ 1.72
PCCBP05166 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCCBP05166 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
PCCBP05166 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.79■■□□□ 1.72
PCCBP05166 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
PCCBP05166 MIR3648-2-201ENST00000581792 180 ntBASIC25.79■■□□□ 1.72
PCCBP05166 MIR3648-1-201ENST00000615959 180 ntBASIC25.79■■□□□ 1.72
PCCBP05166 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCCBP05166 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.78■■□□□ 1.72
PCCBP05166 AC016575.1-201ENST00000607026 382 ntBASIC25.78■■□□□ 1.72
PCCBP05166 CR559946.2-201ENST00000623684 991 ntBASIC25.78■■□□□ 1.72
PCCBP05166 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCCBP05166 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.77■■□□□ 1.72
PCCBP05166 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.77■■□□□ 1.72
PCCBP05166 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.77■■□□□ 1.72
PCCBP05166 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCCBP05166 ST7-AS1-201ENST00000456775 1889 ntBASIC25.77■■□□□ 1.72
PCCBP05166 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCCBP05166 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCCBP05166 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCCBP05166 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCCBP05166 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCCBP05166 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
PCCBP05166 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
PCCBP05166 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCCBP05166 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.75■■□□□ 1.71
PCCBP05166 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCCBP05166 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.74■■□□□ 1.71
PCCBP05166 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.74■■□□□ 1.71
PCCBP05166 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCCBP05166 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PCCBP05166 DUX4L13-201ENST00000554103 1267 ntBASIC25.73■■□□□ 1.71
PCCBP05166 DUX4L15-201ENST00000611059 1267 ntBASIC25.73■■□□□ 1.71
PCCBP05166 DUX4L23-201ENST00000615195 1269 ntBASIC25.73■■□□□ 1.71
PCCBP05166 DUX4L24-201ENST00000617576 1269 ntBASIC25.73■■□□□ 1.71
PCCBP05166 DUX4L22-201ENST00000618238 1269 ntBASIC25.73■■□□□ 1.71
PCCBP05166 DUX4L20-201ENST00000619712 1269 ntBASIC25.73■■□□□ 1.71
PCCBP05166 DUX4L21-201ENST00000622058 1269 ntBASIC25.73■■□□□ 1.71
PCCBP05166 DUX4L10-201ENST00000622460 1267 ntBASIC25.73■■□□□ 1.71
PCCBP05166 DUX4L25-201ENST00000624915 1269 ntBASIC25.73■■□□□ 1.71
PCCBP05166 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCCBP05166 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCCBP05166 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.72■■□□□ 1.71
PCCBP05166 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCCBP05166 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
PCCBP05166 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCCBP05166 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCCBP05166 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.71■■□□□ 1.71
PCCBP05166 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCCBP05166 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.71
PCCBP05166 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
PCCBP05166 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PCCBP05166 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCCBP05166 MIR639-201ENST00000384974 98 ntBASIC25.69■■□□□ 1.7
PCCBP05166 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.69■■□□□ 1.7
PCCBP05166 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCCBP05166 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCCBP05166 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.68■■□□□ 1.7
PCCBP05166 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
PCCBP05166 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
PCCBP05166 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCCBP05166 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCCBP05166 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCCBP05166 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.66■■□□□ 1.7
PCCBP05166 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.66■■□□□ 1.7
PCCBP05166 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCCBP05166 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.66■■□□□ 1.7
PCCBP05166 WHAMMP2-203ENST00000563942 1603 ntBASIC25.65■■□□□ 1.7
PCCBP05166 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.65■■□□□ 1.7
PCCBP05166 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCCBP05166 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCCBP05166 AC135983.2-203ENST00000454486 1613 ntBASIC25.64■■□□□ 1.7
PCCBP05166 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.64■■□□□ 1.7
PCCBP05166 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
PCCBP05166 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.63■■□□□ 1.69
PCCBP05166 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCCBP05166 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
PCCBP05166 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCCBP05166 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCCBP05166 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.61■■□□□ 1.69
PCCBP05166 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCCBP05166 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCCBP05166 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
PCCBP05166 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCCBP05166 MIR4449-201ENST00000578365 66 ntBASIC25.59■■□□□ 1.69
PCCBP05166 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
PCCBP05166 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
PCCBP05166 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms