Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
SMAD6O43541 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
SMAD6O43541 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.44■■□□□ 1.82
SMAD6O43541 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
SMAD6O43541 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SMAD6O43541 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.43■■□□□ 1.82
SMAD6O43541 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.42■■□□□ 1.82
SMAD6O43541 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
SMAD6O43541 LINC01971-201ENST00000617888 1048 ntBASIC26.41■■□□□ 1.82
SMAD6O43541 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SMAD6O43541 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.41■■□□□ 1.82
SMAD6O43541 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
SMAD6O43541 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.4■■□□□ 1.82
SMAD6O43541 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
SMAD6O43541 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.39■■□□□ 1.81
SMAD6O43541 ABCB10P1-201ENST00000614297 2181 ntBASIC26.39■■□□□ 1.81
SMAD6O43541 LINC00273-201ENST00000539813 1452 ntBASIC26.38■■□□□ 1.81
SMAD6O43541 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.38■■□□□ 1.81
SMAD6O43541 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMAD6O43541 DUX4L11-201ENST00000611504 1267 ntBASIC26.37■■□□□ 1.81
SMAD6O43541 DUX4L12-201ENST00000614593 1267 ntBASIC26.37■■□□□ 1.81
SMAD6O43541 DUX4L14-201ENST00000621227 1267 ntBASIC26.37■■□□□ 1.81
SMAD6O43541 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.37■■□□□ 1.81
SMAD6O43541 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.36■■□□□ 1.81
SMAD6O43541 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SMAD6O43541 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMAD6O43541 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.35■■□□□ 1.81
SMAD6O43541 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
SMAD6O43541 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMAD6O43541 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
SMAD6O43541 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMAD6O43541 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SMAD6O43541 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SMAD6O43541 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SMAD6O43541 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
SMAD6O43541 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.32■■□□□ 1.8
SMAD6O43541 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMAD6O43541 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMAD6O43541 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMAD6O43541 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMAD6O43541 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
SMAD6O43541 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
SMAD6O43541 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.3■■□□□ 1.8
SMAD6O43541 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMAD6O43541 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMAD6O43541 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.3■■□□□ 1.8
SMAD6O43541 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.29■■□□□ 1.8
SMAD6O43541 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.28■■□□□ 1.8
SMAD6O43541 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.28■■□□□ 1.8
SMAD6O43541 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMAD6O43541 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.27■■□□□ 1.8
SMAD6O43541 HLA-V-202ENST00000446817 847 ntBASIC26.27■■□□□ 1.8
SMAD6O43541 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.27■■□□□ 1.8
SMAD6O43541 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.27■■□□□ 1.8
SMAD6O43541 MIR3648-2-201ENST00000581792 180 ntBASIC26.27■■□□□ 1.8
SMAD6O43541 MIR3648-1-201ENST00000615959 180 ntBASIC26.27■■□□□ 1.8
SMAD6O43541 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMAD6O43541 AC135983.2-203ENST00000454486 1613 ntBASIC26.27■■□□□ 1.8
SMAD6O43541 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMAD6O43541 WHAMMP2-203ENST00000563942 1603 ntBASIC26.26■■□□□ 1.79
SMAD6O43541 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
SMAD6O43541 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.26■■□□□ 1.79
SMAD6O43541 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.26■■□□□ 1.79
SMAD6O43541 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.26■■□□□ 1.79
SMAD6O43541 CR559946.2-201ENST00000623684 991 ntBASIC26.26■■□□□ 1.79
SMAD6O43541 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.26■■□□□ 1.79
SMAD6O43541 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMAD6O43541 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.25■■□□□ 1.79
SMAD6O43541 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.25■■□□□ 1.79
SMAD6O43541 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
SMAD6O43541 DUX4L13-201ENST00000554103 1267 ntBASIC26.24■■□□□ 1.79
SMAD6O43541 AC016575.1-201ENST00000607026 382 ntBASIC26.24■■□□□ 1.79
SMAD6O43541 DUX4L15-201ENST00000611059 1267 ntBASIC26.24■■□□□ 1.79
SMAD6O43541 DUX4L23-201ENST00000615195 1269 ntBASIC26.24■■□□□ 1.79
SMAD6O43541 DUX4L24-201ENST00000617576 1269 ntBASIC26.24■■□□□ 1.79
SMAD6O43541 DUX4L22-201ENST00000618238 1269 ntBASIC26.24■■□□□ 1.79
SMAD6O43541 DUX4L20-201ENST00000619712 1269 ntBASIC26.24■■□□□ 1.79
SMAD6O43541 DUX4L21-201ENST00000622058 1269 ntBASIC26.24■■□□□ 1.79
SMAD6O43541 DUX4L10-201ENST00000622460 1267 ntBASIC26.24■■□□□ 1.79
SMAD6O43541 DUX4L25-201ENST00000624915 1269 ntBASIC26.24■■□□□ 1.79
SMAD6O43541 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SMAD6O43541 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SMAD6O43541 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SMAD6O43541 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.23■■□□□ 1.79
SMAD6O43541 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SMAD6O43541 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
SMAD6O43541 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SMAD6O43541 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SMAD6O43541 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SMAD6O43541 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.22■■□□□ 1.79
SMAD6O43541 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SMAD6O43541 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SMAD6O43541 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
SMAD6O43541 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMAD6O43541 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMAD6O43541 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.21■■□□□ 1.79
SMAD6O43541 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.21■■□□□ 1.79
SMAD6O43541 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SMAD6O43541 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
SMAD6O43541 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.2■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms