Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
NPC1O15118 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
NPC1O15118 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
NPC1O15118 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
NPC1O15118 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
NPC1O15118 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
NPC1O15118 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
NPC1O15118 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
NPC1O15118 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
NPC1O15118 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.5■■□□□ 1.83
NPC1O15118 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.5■■□□□ 1.83
NPC1O15118 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
NPC1O15118 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.49■■□□□ 1.83
NPC1O15118 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
NPC1O15118 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.49■■□□□ 1.83
NPC1O15118 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.48■■□□□ 1.83
NPC1O15118 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.48■■□□□ 1.83
NPC1O15118 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.48■■□□□ 1.83
NPC1O15118 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.47■■□□□ 1.83
NPC1O15118 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NPC1O15118 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.46■■□□□ 1.83
NPC1O15118 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NPC1O15118 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NPC1O15118 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
NPC1O15118 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
NPC1O15118 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
NPC1O15118 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.43■■□□□ 1.82
NPC1O15118 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
NPC1O15118 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
NPC1O15118 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.42■■□□□ 1.82
NPC1O15118 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.42■■□□□ 1.82
NPC1O15118 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.41■■□□□ 1.82
NPC1O15118 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
NPC1O15118 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.4■■□□□ 1.82
NPC1O15118 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
NPC1O15118 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
NPC1O15118 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NPC1O15118 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
NPC1O15118 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.37■■□□□ 1.81
NPC1O15118 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NPC1O15118 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.37■■□□□ 1.81
NPC1O15118 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NPC1O15118 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
NPC1O15118 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.35■■□□□ 1.81
NPC1O15118 HSD17B1P1-201ENST00000590052 955 ntBASIC26.35■■□□□ 1.81
NPC1O15118 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.34■■□□□ 1.81
NPC1O15118 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
NPC1O15118 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NPC1O15118 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
NPC1O15118 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.33■■□□□ 1.81
NPC1O15118 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.32■■□□□ 1.8
NPC1O15118 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
NPC1O15118 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
NPC1O15118 AL135925.1-201ENST00000605920 1701 ntBASIC26.31■■□□□ 1.8
NPC1O15118 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
NPC1O15118 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
NPC1O15118 AC127502.1-201ENST00000399971 1502 ntBASIC26.29■■□□□ 1.8
NPC1O15118 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.29■■□□□ 1.8
NPC1O15118 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
NPC1O15118 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
NPC1O15118 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.29■■□□□ 1.8
NPC1O15118 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.28■■□□□ 1.8
NPC1O15118 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NPC1O15118 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NPC1O15118 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.28■■□□□ 1.8
NPC1O15118 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NPC1O15118 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
NPC1O15118 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NPC1O15118 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
NPC1O15118 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
NPC1O15118 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
NPC1O15118 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
NPC1O15118 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
NPC1O15118 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.27■■□□□ 1.8
NPC1O15118 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.27■■□□□ 1.8
NPC1O15118 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
NPC1O15118 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
NPC1O15118 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
NPC1O15118 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.26■■□□□ 1.79
NPC1O15118 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
NPC1O15118 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.25■■□□□ 1.79
NPC1O15118 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
NPC1O15118 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
NPC1O15118 AC135983.2-203ENST00000454486 1613 ntBASIC26.24■■□□□ 1.79
NPC1O15118 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
NPC1O15118 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NPC1O15118 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
NPC1O15118 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.23■■□□□ 1.79
NPC1O15118 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
NPC1O15118 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
NPC1O15118 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NPC1O15118 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
NPC1O15118 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NPC1O15118 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.22■■□□□ 1.79
NPC1O15118 AC008813.1-201ENST00000536597 885 ntBASIC26.22■■□□□ 1.79
NPC1O15118 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.22■■□□□ 1.79
NPC1O15118 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.22■■□□□ 1.79
NPC1O15118 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.22■■□□□ 1.79
NPC1O15118 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
NPC1O15118 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms