Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.33■■■□□ 2.29
DDX39AO00148 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.32■■■□□ 2.28
DDX39AO00148 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC29.31■■■□□ 2.28
DDX39AO00148 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC29.31■■■□□ 2.28
DDX39AO00148 MBP-237ENST00000579129 1052 ntTSL 5 BASIC29.31■■■□□ 2.28
DDX39AO00148 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.31■■■□□ 2.28
DDX39AO00148 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
DDX39AO00148 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
DDX39AO00148 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC29.31■■■□□ 2.28
DDX39AO00148 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC29.31■■■□□ 2.28
DDX39AO00148 HLA-V-202ENST00000446817 847 ntBASIC29.3■■■□□ 2.28
DDX39AO00148 DUX4L11-201ENST00000611504 1267 ntBASIC29.3■■■□□ 2.28
DDX39AO00148 DUX4L12-201ENST00000614593 1267 ntBASIC29.3■■■□□ 2.28
DDX39AO00148 DUX4L14-201ENST00000621227 1267 ntBASIC29.3■■■□□ 2.28
DDX39AO00148 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC29.29■■■□□ 2.28
DDX39AO00148 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
DDX39AO00148 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC29.28■■■□□ 2.28
DDX39AO00148 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.28■■■□□ 2.28
DDX39AO00148 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC29.26■■■□□ 2.27
DDX39AO00148 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
DDX39AO00148 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.26■■■□□ 2.27
DDX39AO00148 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.26■■■□□ 2.27
DDX39AO00148 LINC00273-201ENST00000539813 1452 ntBASIC29.25■■■□□ 2.27
DDX39AO00148 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
DDX39AO00148 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC29.24■■■□□ 2.27
DDX39AO00148 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
DDX39AO00148 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC29.23■■■□□ 2.27
DDX39AO00148 RPS2-202ENST00000526522 924 ntTSL 2 BASIC29.22■■■□□ 2.27
DDX39AO00148 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
DDX39AO00148 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
DDX39AO00148 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
DDX39AO00148 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
DDX39AO00148 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.21■■■□□ 2.27
DDX39AO00148 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC29.21■■■□□ 2.27
DDX39AO00148 ABCB10P1-201ENST00000614297 2181 ntBASIC29.2■■■□□ 2.27
DDX39AO00148 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
DDX39AO00148 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.2■■■□□ 2.26
DDX39AO00148 MIR3648-2-201ENST00000581792 180 ntBASIC29.19■■■□□ 2.26
DDX39AO00148 AC016575.1-201ENST00000607026 382 ntBASIC29.19■■■□□ 2.26
DDX39AO00148 MIR3648-1-201ENST00000615959 180 ntBASIC29.19■■■□□ 2.26
DDX39AO00148 CR559946.2-201ENST00000623684 991 ntBASIC29.19■■■□□ 2.26
DDX39AO00148 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
DDX39AO00148 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC29.18■■■□□ 2.26
DDX39AO00148 MACF1-219ENST00000484793 834 ntTSL 2 BASIC29.18■■■□□ 2.26
DDX39AO00148 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
DDX39AO00148 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
DDX39AO00148 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
DDX39AO00148 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC29.17■■■□□ 2.26
DDX39AO00148 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
DDX39AO00148 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
DDX39AO00148 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
DDX39AO00148 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC29.16■■■□□ 2.26
DDX39AO00148 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.16■■■□□ 2.26
DDX39AO00148 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
DDX39AO00148 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
DDX39AO00148 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
DDX39AO00148 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
DDX39AO00148 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
DDX39AO00148 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC29.15■■■□□ 2.26
DDX39AO00148 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.15■■■□□ 2.26
DDX39AO00148 WHAMMP2-203ENST00000563942 1603 ntBASIC29.13■■■□□ 2.25
DDX39AO00148 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC29.13■■■□□ 2.25
DDX39AO00148 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC29.13■■■□□ 2.25
DDX39AO00148 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
DDX39AO00148 CHML-204ENST00000638121 920 ntTSL 2 BASIC29.13■■■□□ 2.25
DDX39AO00148 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
DDX39AO00148 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
DDX39AO00148 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
DDX39AO00148 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.12■■■□□ 2.25
DDX39AO00148 DUX4L13-201ENST00000554103 1267 ntBASIC29.12■■■□□ 2.25
DDX39AO00148 DUX4L15-201ENST00000611059 1267 ntBASIC29.12■■■□□ 2.25
DDX39AO00148 DUX4L23-201ENST00000615195 1269 ntBASIC29.12■■■□□ 2.25
DDX39AO00148 DUX4L24-201ENST00000617576 1269 ntBASIC29.12■■■□□ 2.25
DDX39AO00148 DUX4L22-201ENST00000618238 1269 ntBASIC29.12■■■□□ 2.25
DDX39AO00148 DUX4L20-201ENST00000619712 1269 ntBASIC29.12■■■□□ 2.25
DDX39AO00148 DUX4L21-201ENST00000622058 1269 ntBASIC29.12■■■□□ 2.25
DDX39AO00148 DUX4L10-201ENST00000622460 1267 ntBASIC29.12■■■□□ 2.25
DDX39AO00148 DUX4L25-201ENST00000624915 1269 ntBASIC29.12■■■□□ 2.25
DDX39AO00148 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
DDX39AO00148 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.12■■■□□ 2.25
DDX39AO00148 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
DDX39AO00148 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
DDX39AO00148 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.11■■■□□ 2.25
DDX39AO00148 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.11■■■□□ 2.25
DDX39AO00148 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
DDX39AO00148 AC135983.2-203ENST00000454486 1613 ntBASIC29.1■■■□□ 2.25
DDX39AO00148 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
DDX39AO00148 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
DDX39AO00148 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
DDX39AO00148 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC29.09■■■□□ 2.25
DDX39AO00148 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC29.09■■■□□ 2.25
DDX39AO00148 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC29.09■■■□□ 2.25
DDX39AO00148 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
DDX39AO00148 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
DDX39AO00148 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
DDX39AO00148 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC29.07■■■□□ 2.24
DDX39AO00148 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.06■■■□□ 2.24
DDX39AO00148 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.05■■■□□ 2.24
DDX39AO00148 MIR639-201ENST00000384974 98 ntBASIC29.04■■■□□ 2.24
DDX39AO00148 HES6-205ENST00000409356 528 ntTSL 2 BASIC29.03■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms