Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV22A0A0B4J277 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TRAV22A0A0B4J277 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC14.77□□□□□ -0.05
TRAV22A0A0B4J277 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
TRAV22A0A0B4J277 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV22A0A0B4J277 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TRAV22A0A0B4J277 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV22A0A0B4J277 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV22A0A0B4J277 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
TRAV22A0A0B4J277 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV22A0A0B4J277 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV22A0A0B4J277 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV22A0A0B4J277 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV22A0A0B4J277 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV22A0A0B4J277 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV22A0A0B4J277 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRAV22A0A0B4J277 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV22A0A0B4J277 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV22A0A0B4J277 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV22A0A0B4J277 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV22A0A0B4J277 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV22A0A0B4J277 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV22A0A0B4J277 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV22A0A0B4J277 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV22A0A0B4J277 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV22A0A0B4J277 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV22A0A0B4J277 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
TRAV22A0A0B4J277 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV22A0A0B4J277 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TRAV22A0A0B4J277 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV22A0A0B4J277 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC14.71□□□□□ -0.05
TRAV22A0A0B4J277 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV22A0A0B4J277 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV22A0A0B4J277 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV22A0A0B4J277 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV22A0A0B4J277 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV22A0A0B4J277 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV22A0A0B4J277 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TRAV22A0A0B4J277 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC14.71□□□□□ -0.06
TRAV22A0A0B4J277 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC14.71□□□□□ -0.06
TRAV22A0A0B4J277 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TRAV22A0A0B4J277 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TRAV22A0A0B4J277 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
TRAV22A0A0B4J277 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV22A0A0B4J277 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV22A0A0B4J277 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV22A0A0B4J277 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV22A0A0B4J277 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV22A0A0B4J277 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV22A0A0B4J277 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV22A0A0B4J277 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRAV22A0A0B4J277 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV22A0A0B4J277 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
TRAV22A0A0B4J277 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV22A0A0B4J277 AL449106.1-201ENST00000608517 1980 ntBASIC14.67□□□□□ -0.06
TRAV22A0A0B4J277 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TRAV22A0A0B4J277 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV22A0A0B4J277 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV22A0A0B4J277 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV22A0A0B4J277 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV22A0A0B4J277 DRD5P2-201ENST00000421395 2012 ntBASIC14.65□□□□□ -0.06
TRAV22A0A0B4J277 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV22A0A0B4J277 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
TRAV22A0A0B4J277 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV22A0A0B4J277 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV22A0A0B4J277 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV22A0A0B4J277 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAV22A0A0B4J277 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV22A0A0B4J277 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TRAV22A0A0B4J277 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV22A0A0B4J277 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV22A0A0B4J277 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRAV22A0A0B4J277 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV22A0A0B4J277 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV22A0A0B4J277 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAV22A0A0B4J277 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAV22A0A0B4J277 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
TRAV22A0A0B4J277 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV22A0A0B4J277 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV22A0A0B4J277 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV22A0A0B4J277 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV22A0A0B4J277 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAV22A0A0B4J277 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
TRAV22A0A0B4J277 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
TRAV22A0A0B4J277 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAV22A0A0B4J277 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV22A0A0B4J277 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV22A0A0B4J277 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV22A0A0B4J277 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV22A0A0B4J277 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV22A0A0B4J277 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV22A0A0B4J277 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAV22A0A0B4J277 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAV22A0A0B4J277 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAV22A0A0B4J277 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
TRAV22A0A0B4J277 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAV22A0A0B4J277 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV22A0A0B4J277 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAV22A0A0B4J277 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAV22A0A0B4J277 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms