Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.42□□□□□ -1.38
CHD8Q9HCK8 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 SIPA1L2-201ENST00000262861 6555 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.41□□□□□ -1.38
CHD8Q9HCK8 AC083862.1-201ENST00000427378 1242 ntBASIC6.41□□□□□ -1.38
CHD8Q9HCK8 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 TVP23CP1-201ENST00000450317 639 ntBASIC6.41□□□□□ -1.38
CHD8Q9HCK8 RN7SL826P-201ENST00000479724 288 ntBASIC6.41□□□□□ -1.38
CHD8Q9HCK8 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 TMEM97P2-201ENST00000517841 403 ntBASIC6.41□□□□□ -1.38
CHD8Q9HCK8 IGHVIII-26-1-201ENST00000520387 250 ntBASIC6.41□□□□□ -1.38
CHD8Q9HCK8 AC023946.1-201ENST00000526867 594 ntTSL 3 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 SNORA74.4-201ENST00000607595 199 ntBASIC6.41□□□□□ -1.38
CHD8Q9HCK8 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 FAH-204ENST00000539156 3427 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 PHF2P2-202ENST00000444553 2865 ntBASIC6.41□□□□□ -1.38
CHD8Q9HCK8 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 MIR130B-202ENST00000385018 82 ntBASIC6.41□□□□□ -1.38
CHD8Q9HCK8 SNORA11.2-201ENST00000408318 127 ntBASIC6.41□□□□□ -1.38
CHD8Q9HCK8 MTND2P12-201ENST00000417560 1252 ntBASIC6.41□□□□□ -1.38
CHD8Q9HCK8 GEMIN2P2-201ENST00000418195 715 ntBASIC6.41□□□□□ -1.38
CHD8Q9HCK8 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.41□□□□□ -1.38
CHD8Q9HCK8 AC133965.1-201ENST00000452984 354 ntBASIC6.41□□□□□ -1.38
CHD8Q9HCK8 AZGP1P2-201ENST00000454506 345 ntBASIC6.41□□□□□ -1.38
CHD8Q9HCK8 SYNPR-208ENST00000472899 527 ntTSL 4 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 H3F3AP3-201ENST00000497682 407 ntBASIC6.41□□□□□ -1.38
CHD8Q9HCK8 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 IGKV3D-25-201ENST00000519599 235 ntBASIC6.41□□□□□ -1.38
CHD8Q9HCK8 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 AC127459.1-201ENST00000563129 2768 ntBASIC6.41□□□□□ -1.38
CHD8Q9HCK8 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CHD8Q9HCK8 AC023154.1-203ENST00000508813 2465 ntTSL 2 BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 PSMC1P6-201ENST00000477233 1319 ntBASIC6.4□□□□□ -1.38
CHD8Q9HCK8 BAZ2A-211ENST00000549884 6050 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 C1S-205ENST00000406697 3076 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 RPL21P50-201ENST00000417698 477 ntBASIC6.4□□□□□ -1.38
CHD8Q9HCK8 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 RBMY3AP-201ENST00000449381 1145 ntBASIC6.4□□□□□ -1.38
CHD8Q9HCK8 SNORA81.1-201ENST00000458922 177 ntBASIC6.4□□□□□ -1.38
CHD8Q9HCK8 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 AC133552.4-201ENST00000576103 676 ntBASIC6.4□□□□□ -1.38
CHD8Q9HCK8 MIR3663-201ENST00000583207 97 ntBASIC6.4□□□□□ -1.38
CHD8Q9HCK8 AL121809.2-201ENST00000613169 341 ntBASIC6.4□□□□□ -1.38
CHD8Q9HCK8 AC127071.1-201ENST00000624997 712 ntBASIC6.4□□□□□ -1.38
CHD8Q9HCK8 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 HIPK2-201ENST00000342645 2937 ntTSL 5 BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 CA5A-201ENST00000309893 7567 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 AC008627.1-201ENST00000517511 1704 ntBASIC6.4□□□□□ -1.38
CHD8Q9HCK8 TTTY7-201ENST00000276770 1367 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 TTTY7B-201ENST00000276779 1367 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 MYO5A-213ENST00000613858 12139 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC6.4□□□□□ -1.38
CHD8Q9HCK8 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
CHD8Q9HCK8 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
CHD8Q9HCK8 RECQL-203ENST00000421138 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CHD8Q9HCK8 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CHD8Q9HCK8 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC6.4□□□□□ -1.39
CHD8Q9HCK8 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CHD8Q9HCK8 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CHD8Q9HCK8 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
CHD8Q9HCK8 RNU6-1017P-201ENST00000363613 106 ntBASIC6.4□□□□□ -1.39
CHD8Q9HCK8 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC6.4□□□□□ -1.39
CHD8Q9HCK8 OR3A2-201ENST00000408891 1076 ntBASIC6.4□□□□□ -1.39
CHD8Q9HCK8 C4BPAP1-201ENST00000415474 1893 ntBASIC6.4□□□□□ -1.39
CHD8Q9HCK8 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.4□□□□□ -1.39
CHD8Q9HCK8 ZNHIT6-202ENST00000431532 6080 ntTSL 2 BASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 277.1 ms