Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC8.73□□□□□ -1.01
COL15A1P39059 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC8.73□□□□□ -1.01
COL15A1P39059 GRIA4-206ENST00000525187 2822 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
COL15A1P39059 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.73□□□□□ -1.01
COL15A1P39059 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
COL15A1P39059 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
COL15A1P39059 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC8.73□□□□□ -1.01
COL15A1P39059 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC8.73□□□□□ -1.01
COL15A1P39059 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC8.73□□□□□ -1.01
COL15A1P39059 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
COL15A1P39059 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
COL15A1P39059 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
COL15A1P39059 ACKR2-202ENST00000442925 2879 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
COL15A1P39059 UBBP1-201ENST00000392399 473 ntBASIC8.73□□□□□ -1.01
COL15A1P39059 AL391419.1-201ENST00000398901 1275 ntBASIC8.73□□□□□ -1.01
COL15A1P39059 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC8.73□□□□□ -1.01
COL15A1P39059 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC8.73□□□□□ -1.01
COL15A1P39059 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC8.73□□□□□ -1.01
COL15A1P39059 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC8.73□□□□□ -1.01
COL15A1P39059 AC018797.1-201ENST00000510791 255 ntBASIC8.73□□□□□ -1.01
COL15A1P39059 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC8.73□□□□□ -1.01
COL15A1P39059 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC8.73□□□□□ -1.01
COL15A1P39059 TOMM20P1-201ENST00000534518 427 ntBASIC8.73□□□□□ -1.01
COL15A1P39059 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC8.73□□□□□ -1.01
COL15A1P39059 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC8.73□□□□□ -1.01
COL15A1P39059 AL035410.2-201ENST00000604963 864 ntBASIC8.73□□□□□ -1.01
COL15A1P39059 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
COL15A1P39059 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
COL15A1P39059 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
COL15A1P39059 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC8.73□□□□□ -1.01
COL15A1P39059 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
COL15A1P39059 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
COL15A1P39059 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
COL15A1P39059 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.72□□□□□ -1.01
COL15A1P39059 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
COL15A1P39059 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC8.72□□□□□ -1.01
COL15A1P39059 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
COL15A1P39059 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
COL15A1P39059 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC8.72□□□□□ -1.01
COL15A1P39059 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
COL15A1P39059 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
COL15A1P39059 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
COL15A1P39059 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
COL15A1P39059 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
COL15A1P39059 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC8.72□□□□□ -1.01
COL15A1P39059 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
COL15A1P39059 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC8.72□□□□□ -1.01
COL15A1P39059 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
COL15A1P39059 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
COL15A1P39059 AC104447.1-201ENST00000624214 2124 ntBASIC8.72□□□□□ -1.01
COL15A1P39059 MAPK10-357ENST00000641831 2858 ntBASIC8.72□□□□□ -1.01
COL15A1P39059 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC8.72□□□□□ -1.01
COL15A1P39059 AC009166.2-201ENST00000624410 2833 ntBASIC8.72□□□□□ -1.01
COL15A1P39059 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC8.72□□□□□ -1.01
COL15A1P39059 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
COL15A1P39059 RNA5SP512-201ENST00000364550 120 ntBASIC8.72□□□□□ -1.01
COL15A1P39059 RN7SKP269-201ENST00000365545 319 ntBASIC8.72□□□□□ -1.01
COL15A1P39059 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
COL15A1P39059 AL590762.1-201ENST00000391782 432 ntBASIC8.72□□□□□ -1.01
COL15A1P39059 SEPT7P2-202ENST00000398921 823 ntBASIC8.72□□□□□ -1.01
COL15A1P39059 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC8.72□□□□□ -1.01
COL15A1P39059 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
COL15A1P39059 PFN1P11-201ENST00000445829 389 ntBASIC8.72□□□□□ -1.01
COL15A1P39059 RPL23AP28-201ENST00000448062 470 ntBASIC8.72□□□□□ -1.01
COL15A1P39059 AL050331.2-201ENST00000457319 421 ntTSL 3 BASIC8.72□□□□□ -1.01
COL15A1P39059 AC083806.1-201ENST00000468934 316 ntBASIC8.72□□□□□ -1.01
COL15A1P39059 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC8.72□□□□□ -1.01
COL15A1P39059 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC8.72□□□□□ -1.01
COL15A1P39059 SNRPCP6-201ENST00000528310 210 ntBASIC8.72□□□□□ -1.01
COL15A1P39059 EEF1A1P17-201ENST00000547505 1275 ntBASIC8.72□□□□□ -1.01
COL15A1P39059 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC8.72□□□□□ -1.01
COL15A1P39059 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC8.72□□□□□ -1.01
COL15A1P39059 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC8.72□□□□□ -1.01
COL15A1P39059 AL590032.1-201ENST00000604920 252 ntBASIC8.72□□□□□ -1.01
COL15A1P39059 AC073592.6-201ENST00000624271 415 ntBASIC8.72□□□□□ -1.01
COL15A1P39059 AC027348.2-201ENST00000624375 642 ntBASIC8.72□□□□□ -1.01
COL15A1P39059 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC8.72□□□□□ -1.01
COL15A1P39059 AC005614.1-201ENST00000598952 3653 ntBASIC8.72□□□□□ -1.01
COL15A1P39059 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.71□□□□□ -1.01
COL15A1P39059 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC8.71□□□□□ -1.01
COL15A1P39059 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.01
COL15A1P39059 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.71□□□□□ -1.01
COL15A1P39059 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC8.71□□□□□ -1.01
COL15A1P39059 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.71□□□□□ -1.01
COL15A1P39059 ZNF806-201ENST00000438300 1774 ntBASIC8.71□□□□□ -1.01
COL15A1P39059 AC020658.2-201ENST00000559030 4020 ntBASIC8.71□□□□□ -1.01
COL15A1P39059 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
COL15A1P39059 AC011447.6-201ENST00000623510 2598 ntBASIC8.71□□□□□ -1.02
COL15A1P39059 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
COL15A1P39059 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
COL15A1P39059 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
COL15A1P39059 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.71□□□□□ -1.02
COL15A1P39059 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
COL15A1P39059 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC8.71□□□□□ -1.02
COL15A1P39059 RNA5SP140-201ENST00000364524 92 ntBASIC8.71□□□□□ -1.02
COL15A1P39059 ERMN-202ENST00000409216 746 ntTSL 4 BASIC8.71□□□□□ -1.02
COL15A1P39059 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC8.71□□□□□ -1.02
COL15A1P39059 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC8.71□□□□□ -1.02
COL15A1P39059 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC8.71□□□□□ -1.02
COL15A1P39059 RPL12P24-201ENST00000474907 486 ntBASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms