Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SNCA-211ENST00000508895 905 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 LINC00499-204ENST00000515282 579 ntTSL 5 BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 RPL10P9-201ENST00000522551 645 ntBASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 NUTF2P6-201ENST00000560892 385 ntBASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 BPTFP1-201ENST00000579209 492 ntBASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 AC006504.3-201ENST00000586818 523 ntBASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 ZNF793-AS1-205ENST00000589025 560 ntTSL 2 BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 AC022432.1-201ENST00000595739 310 ntBASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 AC006115.1-201ENST00000599726 517 ntTSL 5 BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 AC103792.1-201ENST00000603591 919 ntBASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 AC020910.2-201ENST00000603635 610 ntBASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 AC073137.1-201ENST00000605636 634 ntBASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 AC092354.1-201ENST00000606057 376 ntBASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 SNCA-212ENST00000611107 297 ntTSL 5 BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 PDZK1P1-203ENST00000616036 577 ntTSL 4 BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 LINC00710-219ENST00000635054 938 ntTSL 5 BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 MIR3688-2-201ENST00000636963 87 ntBASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 MTND5P42-201ENST00000637720 498 ntBASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 GBAP1-202ENST00000459805 2922 ntTSL 5 BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 MALAT1-202ENST00000534336 8708 ntBASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 TRIM6-203ENST00000380107 2590 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 KIAA0040-201ENST00000423313 4564 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 ZNF195-230ENST00000620374 3342 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 MIR4458HG-203ENST00000606459 3239 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 SPX-201ENST00000256969 2269 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
SCUBE3Q8IX30 AC135731.2-201ENST00000603029 2098 ntBASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 CRIPT-201ENST00000238892 1953 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AC092329.4-202ENST00000638174 1989 ntTSL 2 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 SYNPR-201ENST00000295894 2607 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 LGALS8-202ENST00000323938 1855 ntTSL 5 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 CLDN2-203ENST00000541806 3150 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 TRIO-201ENST00000344135 4065 ntTSL 2 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 TCAF1-201ENST00000355951 3343 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 TRIM6-212ENST00000621176 3005 ntTSL 5 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 ALDH6A1-202ENST00000553458 5499 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 SMIM7-201ENST00000358726 850 ntTSL 2 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 LST1-211ENST00000376110 433 ntTSL 3 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 FETUB-202ENST00000382134 1055 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 CXADRP1-201ENST00000398098 1095 ntBASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 LINC02449-202ENST00000399866 517 ntTSL 3 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AC244034.1-201ENST00000428027 792 ntBASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 LYZL4-202ENST00000441172 838 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 LINC01713-201ENST00000445589 932 ntTSL 3 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 RPS20P24-201ENST00000457473 361 ntBASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 RPS10P16-201ENST00000483812 496 ntBASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 ALG1L12P-201ENST00000515046 434 ntBASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 OR5AZ1P-201ENST00000527448 943 ntBASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AL352979.1-201ENST00000554238 297 ntBASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 COX5AP2-201ENST00000554418 394 ntBASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AC005479.1-201ENST00000554629 451 ntBASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 OR11J2P-201ENST00000555298 907 ntBASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AC007221.1-201ENST00000570038 796 ntTSL 5 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AC090079.1-201ENST00000572092 1183 ntBASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 UBE2V2P2-201ENST00000587677 504 ntBASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 EIF5AP3-201ENST00000589460 462 ntBASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 C1orf186-208ENST00000603378 614 ntTSL 3 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AC073254.1-206ENST00000617813 907 ntTSL 5 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AC135068.5-201ENST00000624197 983 ntBASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 PCMTD1P7-201ENST00000634506 357 ntBASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 STXBP5-204ENST00000367481 9177 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 C2orf42-205ENST00000420306 2193 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 STAT2-210ENST00000557235 3073 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
SCUBE3Q8IX30 AC009053.1-202ENST00000563377 2051 ntBASIC9.04□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms