Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC11.94□□□□□ -0.5
SMARCA4P51532 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC11.94□□□□□ -0.5
SMARCA4P51532 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC11.94□□□□□ -0.5
SMARCA4P51532 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SMARCA4P51532 NPIPB1P-202ENST00000588786 828 ntBASIC11.94□□□□□ -0.5
SMARCA4P51532 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SMARCA4P51532 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SMARCA4P51532 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC11.94□□□□□ -0.5
SMARCA4P51532 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
SMARCA4P51532 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC11.94□□□□□ -0.5
SMARCA4P51532 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
SMARCA4P51532 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC11.94□□□□□ -0.5
SMARCA4P51532 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC11.94□□□□□ -0.5
SMARCA4P51532 CDY10P-201ENST00000452415 1567 ntBASIC11.93□□□□□ -0.5
SMARCA4P51532 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMARCA4P51532 OR7E25P-201ENST00000344844 931 ntBASIC11.93□□□□□ -0.5
SMARCA4P51532 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC11.93□□□□□ -0.5
SMARCA4P51532 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC11.93□□□□□ -0.5
SMARCA4P51532 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SMARCA4P51532 AC007998.1-201ENST00000474156 672 ntBASIC11.93□□□□□ -0.5
SMARCA4P51532 AC112225.1-201ENST00000508230 297 ntBASIC11.93□□□□□ -0.5
SMARCA4P51532 AC108103.1-201ENST00000511286 446 ntBASIC11.93□□□□□ -0.5
SMARCA4P51532 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC11.93□□□□□ -0.5
SMARCA4P51532 AC011445.2-201ENST00000599274 173 ntBASIC11.93□□□□□ -0.5
SMARCA4P51532 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
SMARCA4P51532 MTR-202ENST00000366577 10529 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMARCA4P51532 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
SMARCA4P51532 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC11.93□□□□□ -0.5
SMARCA4P51532 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
SMARCA4P51532 AC016582.1-202ENST00000636341 2982 ntBASIC11.93□□□□□ -0.5
SMARCA4P51532 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMARCA4P51532 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMARCA4P51532 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMARCA4P51532 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SMARCA4P51532 ARHGAP19-201ENST00000358308 5390 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SMARCA4P51532 MAN1A2-201ENST00000356554 8576 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMARCA4P51532 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
SMARCA4P51532 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC11.93□□□□□ -0.5
SMARCA4P51532 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC11.93□□□□□ -0.5
SMARCA4P51532 AP002453.1-201ENST00000492327 668 ntBASIC11.93□□□□□ -0.5
SMARCA4P51532 RPS10P20-201ENST00000494130 463 ntBASIC11.93□□□□□ -0.5
SMARCA4P51532 RBBP4P1-201ENST00000502424 1276 ntBASIC11.93□□□□□ -0.5
SMARCA4P51532 SNX18P24-201ENST00000505249 671 ntBASIC11.93□□□□□ -0.5
SMARCA4P51532 AC036111.2-201ENST00000533247 901 ntBASIC11.93□□□□□ -0.5
SMARCA4P51532 AC090022.1-201ENST00000546569 311 ntBASIC11.93□□□□□ -0.5
SMARCA4P51532 AC008055.1-201ENST00000547032 609 ntBASIC11.93□□□□□ -0.5
SMARCA4P51532 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMARCA4P51532 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SMARCA4P51532 RN7SL475P-201ENST00000583379 298 ntBASIC11.93□□□□□ -0.5
SMARCA4P51532 AC008555.7-201ENST00000605008 583 ntBASIC11.93□□□□□ -0.5
SMARCA4P51532 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC11.93□□□□□ -0.5
SMARCA4P51532 AP000577.1-201ENST00000624366 878 ntBASIC11.93□□□□□ -0.5
SMARCA4P51532 AC073488.2-201ENST00000631903 751 ntBASIC11.93□□□□□ -0.5
SMARCA4P51532 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SMARCA4P51532 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SMARCA4P51532 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SMARCA4P51532 UBN1-208ENST00000590769 3530 ntTSL 2 BASIC11.93□□□□□ -0.5
SMARCA4P51532 EIF5B-201ENST00000289371 5777 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMARCA4P51532 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC11.92□□□□□ -0.5
SMARCA4P51532 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMARCA4P51532 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMARCA4P51532 LINC01105-203ENST00000431188 3329 ntTSL 5 BASIC11.92□□□□□ -0.5
SMARCA4P51532 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMARCA4P51532 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMARCA4P51532 PLEC-204ENST00000354958 14751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMARCA4P51532 AOX2P-204ENST00000487742 3284 ntBASIC11.92□□□□□ -0.5
SMARCA4P51532 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMARCA4P51532 ERG-210ENST00000442448 5034 ntTSL 5 BASIC11.92□□□□□ -0.5
SMARCA4P51532 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMARCA4P51532 SLIT2-203ENST00000503837 4752 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMARCA4P51532 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC11.92□□□□□ -0.5
SMARCA4P51532 LYARP1-201ENST00000436977 1501 ntBASIC11.92□□□□□ -0.5
SMARCA4P51532 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMARCA4P51532 AC132219.2-201ENST00000624416 2327 ntBASIC11.92□□□□□ -0.5
SMARCA4P51532 CPEB1-209ENST00000614918 4882 ntTSL 5 BASIC11.92□□□□□ -0.5
SMARCA4P51532 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMARCA4P51532 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC11.92□□□□□ -0.5
SMARCA4P51532 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMARCA4P51532 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC11.92□□□□□ -0.5
SMARCA4P51532 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC11.92□□□□□ -0.5
SMARCA4P51532 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC11.92□□□□□ -0.5
SMARCA4P51532 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMARCA4P51532 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC11.92□□□□□ -0.5
SMARCA4P51532 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
SMARCA4P51532 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SMARCA4P51532 ZNF195-230ENST00000620374 3342 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SMARCA4P51532 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMARCA4P51532 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC11.92□□□□□ -0.5
SMARCA4P51532 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMARCA4P51532 MYO15A-201ENST00000205890 11863 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
SMARCA4P51532 MYO15A-217ENST00000615845 11860 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
SMARCA4P51532 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SMARCA4P51532 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC11.91□□□□□ -0.5
SMARCA4P51532 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMARCA4P51532 MTCO1P11-201ENST00000429111 1528 ntBASIC11.91□□□□□ -0.5
SMARCA4P51532 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC11.91□□□□□ -0.5
SMARCA4P51532 C2orf71-201ENST00000331664 7044 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SMARCA4P51532 USP46-202ENST00000451218 4622 ntTSL 5 BASIC11.91□□□□□ -0.5
SMARCA4P51532 AL157702.1-201ENST00000398764 426 ntBASIC11.91□□□□□ -0.5
SMARCA4P51532 AL590240.2-201ENST00000413370 894 ntBASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms