Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AL022329.1-201ENST00000412773 488 ntTSL 2 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AL122008.2-201ENST00000412915 570 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AL513302.1-201ENST00000415679 428 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 ATG4AP1-201ENST00000416893 538 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AC006457.1-201ENST00000420733 392 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AC004074.1-201ENST00000421810 1063 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 KRT223P-201ENST00000422957 519 ntTSL 2 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 DEFB130D-201ENST00000426866 237 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 MTND3P21-201ENST00000433774 331 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AL080317.1-201ENST00000444259 557 ntTSL 2 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 BUD31P2-201ENST00000449374 300 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 TPMTP4-201ENST00000450749 678 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AL392003.2-201ENST00000451015 679 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AL391825.1-202ENST00000458136 741 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AC087501.2-201ENST00000466869 581 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 RPL21P47-201ENST00000483696 477 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AC104063.1-201ENST00000504840 702 ntTSL 3 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AC097375.1-201ENST00000507949 488 ntTSL 3 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 SNCA-211ENST00000508895 905 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AC098799.2-201ENST00000509466 868 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 LINC00499-204ENST00000515282 579 ntTSL 5 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 RNU6-405P-201ENST00000516637 110 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 PRB4-203ENST00000535904 796 ntAPPRIS P3 TSL 2 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AC137767.1-202ENST00000543072 752 ntTSL 2 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AC015909.4-201ENST00000577175 578 ntTSL 4 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AC090213.1-201ENST00000586841 546 ntTSL 4 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AL583832.1-201ENST00000603227 784 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AC090950.1-201ENST00000604625 830 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AC009502.1-202ENST00000606673 602 ntTSL 3 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 SNCA-212ENST00000611107 297 ntTSL 5 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AC104237.3-201ENST00000611809 427 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AL121594.6-201ENST00000633440 261 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AC009971.1-201ENST00000634253 673 ntTSL 5 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 AC099654.12-201ENST00000639868 649 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 FBXW11P1-201ENST00000393804 1474 ntBASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 CERS6-AS1-201ENST00000425636 2890 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 USP17L15-202ENST00000621432 1680 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 ACTR6-202ENST00000546902 1877 ntTSL 2 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC8.3□□□□□ -1.08
CUEDC1Q9NWM3 SSX2B-204ENST00000616191 1344 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 ZKSCAN5-203ENST00000451158 3111 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 IKZF3-205ENST00000350532 1413 ntTSL 5 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 IKZF3-206ENST00000351680 1413 ntTSL 5 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 MAGEE1-201ENST00000361470 3630 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 AC092447.7-201ENST00000422212 1621 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 MSL3P1-201ENST00000438684 2032 ntTSL 2 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 AC044810.2-202ENST00000527847 2503 ntTSL 2 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 CFAP61-207ENST00000389656 776 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 AL031577.2-201ENST00000404133 280 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 Z68694.1-201ENST00000413929 841 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 ARHGEF7-IT1-201ENST00000423329 804 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 AC097721.1-201ENST00000427150 1253 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 MTCO1P43-201ENST00000431831 488 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 BX119904.1-201ENST00000432026 348 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 NANOGP2-201ENST00000435391 727 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 OR7A15P-201ENST00000449848 1009 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 NUTF2P5-201ENST00000475013 379 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 BNIP3P41-201ENST00000503774 571 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 AC108516.2-201ENST00000508163 349 ntTSL 5 BASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 OR5H4P-201ENST00000510851 923 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 GTF2F2P1-201ENST00000511083 675 ntBASIC8.29□□□□□ -1.08
CUEDC1Q9NWM3 HMGB3P13-201ENST00000511263 607 ntBASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms