Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 OR7E163P-201ENST00000505943 894 ntBASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 AP001646.2-201ENST00000528645 1156 ntBASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 GLYATL1P4-201ENST00000529326 906 ntBASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 AP004607.5-201ENST00000532034 217 ntBASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 AC023080.1-201ENST00000551663 931 ntBASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 RN7SL42P-201ENST00000579786 294 ntBASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 AC113361.1-201ENST00000606683 543 ntBASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 AC211433.3-201ENST00000623770 375 ntBASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC8.58□□□□□ -1.04
CHMP4CQ96CF2 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 NPM1P14-201ENST00000343743 866 ntBASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 RNA5SP218-201ENST00000363188 109 ntBASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 DEFA11P-201ENST00000446470 261 ntBASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 PSPC1P2-201ENST00000455130 225 ntBASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 VN1R6P-201ENST00000458417 907 ntBASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 AL928654.1-201ENST00000476081 354 ntBASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 RPL7AP30-201ENST00000482859 796 ntBASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 LNX1-AS2-202ENST00000509974 628 ntTSL 2 BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 RPS23-208ENST00000512493 443 ntTSL 3 BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 SNORA48.9-201ENST00000516419 162 ntBASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 AC087855.2-201ENST00000518217 537 ntTSL 3 BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 RGS5-220ENST00000528689 566 ntTSL 5 BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 AC068790.1-201ENST00000536166 355 ntBASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 FAM30C-201ENST00000561158 410 ntBASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 RPS7P1-201ENST00000571702 585 ntBASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 AC099777.1-201ENST00000603779 1070 ntBASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 AC122710.3-201ENST00000606566 541 ntBASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 AL049536.1-202ENST00000623572 455 ntTSL 5 BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 AC010168.2-201ENST00000562691 5428 ntBASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 MIPEPP2-201ENST00000422560 1819 ntBASIC8.57□□□□□ -1.04
CHMP4CQ96CF2 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 MIR1204-201ENST00000408388 67 ntBASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 SNORA81-201ENST00000408493 178 ntBASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 MEAF6P1-201ENST00000416092 327 ntBASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 AC117434.1-201ENST00000419971 836 ntBASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 PPIAP23-201ENST00000420099 497 ntBASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 OR7E117P-201ENST00000422682 1112 ntBASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 GSTA6P-201ENST00000424144 582 ntBASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 FDPSP1-201ENST00000424976 1071 ntBASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 AC073900.1-201ENST00000429766 776 ntBASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 AC104698.1-201ENST00000435671 276 ntBASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 AL161626.1-201ENST00000441480 490 ntBASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 RPL21P33-201ENST00000444831 484 ntBASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 PMS2P11-201ENST00000451831 574 ntBASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 RPLP0P1-201ENST00000457002 361 ntBASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 AC079594.1-201ENST00000489757 331 ntBASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC8.56□□□□□ -1.04
CHMP4CQ96CF2 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC8.56□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms