Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 TBC1D31-202ENST00000327098 2985 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 SALL4P7-201ENST00000555779 3120 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 GABRE-201ENST00000370328 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 DEFB104A-201ENST00000314265 281 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 DEFB104B-201ENST00000316169 281 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 Y_RNA.11-201ENST00000362375 109 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 RNA5-8SP2-201ENST00000363564 152 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 FAM204BP-201ENST00000369171 701 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 RNU1-28P-201ENST00000383861 164 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 RNU1-27P-201ENST00000383869 164 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 RNU1-1-201ENST00000383925 164 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 RNU6-468P-201ENST00000384003 109 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 RNVU1-18-201ENST00000384010 164 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 RNU1-2-201ENST00000384278 164 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 RNU1-4-201ENST00000384659 164 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 RNU1-3-201ENST00000384782 164 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 TRBV23OR9-2-201ENST00000390389 335 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AL139274.1-201ENST00000402374 936 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AL034372.1-201ENST00000407586 754 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 HCG18-234ENST00000413358 916 ntTSL 3 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 RPF2P1-201ENST00000424137 906 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 PAICSP1-201ENST00000425324 1217 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC010099.2-201ENST00000443177 373 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 MTCO1P48-201ENST00000448024 1096 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 RN7SL749P-201ENST00000460421 290 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 IGKV1-16-201ENST00000479981 378 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 RPL9P33-201ENST00000484311 566 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 OR5H3P-201ENST00000502817 919 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 OR5H5P-201ENST00000503164 928 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 LINC02102-201ENST00000503989 3364 ntTSL 2 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC112192.1-201ENST00000515086 553 ntTSL 4 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 NREP-223ENST00000515855 801 ntTSL 4 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 RNU6-232P-201ENST00000517144 64 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC027698.1-201ENST00000518536 625 ntTSL 3 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 BTF3P1-201ENST00000522014 495 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 TRIM49D2-201ENST00000526396 1411 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC007751.2-201ENST00000534173 291 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC084816.1-211ENST00000540994 485 ntTSL 3 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AP000820.1-201ENST00000545912 506 ntTSL 3 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AL135818.1-202ENST00000554096 1740 ntTSL 3 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC009997.1-201ENST00000557862 129 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 TMX3-204ENST00000562706 937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 snoZ6.4-201ENST00000581669 55 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 MIR3611-201ENST00000584484 83 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 TEX26-AS1-215ENST00000591300 815 ntTSL 5 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 ZNF257-207ENST00000600162 817 ntTSL 3 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC113554.1-201ENST00000606284 490 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 LINC00837-203ENST00000608061 555 ntTSL 4 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 U1.40-201ENST00000610976 164 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC009159.3-201ENST00000615570 804 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 U1.27-201ENST00000615842 164 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 CDK2AP2P1-201ENST00000617479 328 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC079248.2-201ENST00000623779 326 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 AC128688.2-201ENST00000563632 1937 ntBASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 CYFIP2-210ENST00000522463 3477 ntTSL 2 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 ZNF846-202ENST00000586293 1621 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 IL5RA-202ENST00000311981 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 SYNE3-205ENST00000557275 13488 ntAPPRIS ALT1 TSL 2 BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
FOXR1Q6PIV2 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 AC111188.2-201ENST00000529697 1387 ntBASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 LINC00837-201ENST00000443246 3991 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
FOXR1Q6PIV2 LY86-AS1-201ENST00000429345 1941 ntTSL 2 BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms