Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 OIP5-AS1-201ENST00000500949 8829 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 CDY10P-201ENST00000452415 1567 ntBASIC6.48□□□□□ -1.37
CHD8Q9HCK8 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 RN7SKP160-201ENST00000363804 340 ntBASIC6.48□□□□□ -1.37
CHD8Q9HCK8 SNORA51.9-201ENST00000384295 124 ntBASIC6.48□□□□□ -1.37
CHD8Q9HCK8 AL096800.1-201ENST00000405326 893 ntBASIC6.48□□□□□ -1.37
CHD8Q9HCK8 RNA5SP362-201ENST00000516048 118 ntBASIC6.48□□□□□ -1.37
CHD8Q9HCK8 RNA5SP271-201ENST00000516700 88 ntBASIC6.48□□□□□ -1.37
CHD8Q9HCK8 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 RNA5SP440-201ENST00000612665 119 ntBASIC6.48□□□□□ -1.37
CHD8Q9HCK8 LINC00294-201ENST00000631190 3306 ntBASIC6.48□□□□□ -1.37
CHD8Q9HCK8 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 CASC19-246ENST00000641625 1606 ntBASIC6.48□□□□□ -1.37
CHD8Q9HCK8 AC079753.1-201ENST00000623243 3868 ntBASIC6.48□□□□□ -1.37
CHD8Q9HCK8 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 RGS6-205ENST00000406236 1476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CHD8Q9HCK8 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 LINC02059-202ENST00000506471 2094 ntTSL 2 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 PAH-201ENST00000307000 2466 ntTSL 5 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 SLC12A1-203ENST00000396577 4708 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 CACNA1S-202ENST00000367338 5996 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 FAR2P2-201ENST00000413041 594 ntBASIC6.47□□□□□ -1.37
CHD8Q9HCK8 LINC01066-201ENST00000415283 399 ntTSL 3 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 FAR2P4-202ENST00000425399 584 ntBASIC6.47□□□□□ -1.37
CHD8Q9HCK8 SNRPBP1-201ENST00000443634 282 ntBASIC6.47□□□□□ -1.37
CHD8Q9HCK8 FAR2P1-206ENST00000449736 709 ntBASIC6.47□□□□□ -1.37
CHD8Q9HCK8 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 FAM177A1P1-201ENST00000503598 473 ntBASIC6.47□□□□□ -1.37
CHD8Q9HCK8 AC013546.1-201ENST00000523232 564 ntTSL 4 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 AF230666.2-201ENST00000602328 725 ntBASIC6.47□□□□□ -1.37
CHD8Q9HCK8 AL049767.1-202ENST00000637826 242 ntBASIC6.47□□□□□ -1.37
CHD8Q9HCK8 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 PPFIA2-202ENST00000407050 3903 ntTSL 2 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 PUS3-201ENST00000227474 1843 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 ATP2B1-204ENST00000428670 7032 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 TCF4-208ENST00000543082 2399 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 HMGB1P7-201ENST00000450921 612 ntBASIC6.47□□□□□ -1.37
CHD8Q9HCK8 RPS27AP2-201ENST00000457576 465 ntBASIC6.47□□□□□ -1.37
CHD8Q9HCK8 RN7SL654P-201ENST00000479178 292 ntBASIC6.47□□□□□ -1.37
CHD8Q9HCK8 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 LSM3P4-201ENST00000502948 309 ntBASIC6.47□□□□□ -1.37
CHD8Q9HCK8 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 RN7SL178P-201ENST00000582930 304 ntBASIC6.47□□□□□ -1.37
CHD8Q9HCK8 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 CUL4A-212ENST00000617546 5666 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 SIPA1L2-203ENST00000366630 6690 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CHD8Q9HCK8 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC6.46□□□□□ -1.37
CHD8Q9HCK8 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CHD8Q9HCK8 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.46□□□□□ -1.37
CHD8Q9HCK8 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CHD8Q9HCK8 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CHD8Q9HCK8 SLFN13-211ENST00000542635 5921 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CHD8Q9HCK8 AL133320.1-201ENST00000621423 2352 ntBASIC6.46□□□□□ -1.37
CHD8Q9HCK8 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.37
CHD8Q9HCK8 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC6.46□□□□□ -1.37
CHD8Q9HCK8 MIR575-201ENST00000385013 94 ntBASIC6.46□□□□□ -1.38
CHD8Q9HCK8 RNU4-34P-201ENST00000410431 124 ntBASIC6.46□□□□□ -1.38
CHD8Q9HCK8 RPL23AP27-201ENST00000415161 451 ntBASIC6.46□□□□□ -1.38
CHD8Q9HCK8 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 PFN1P6-201ENST00000476786 399 ntBASIC6.46□□□□□ -1.38
CHD8Q9HCK8 AC063943.2-201ENST00000495697 534 ntBASIC6.46□□□□□ -1.38
CHD8Q9HCK8 HULC-201ENST00000503668 556 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.46□□□□□ -1.38
CHD8Q9HCK8 CASC19-238ENST00000641523 1558 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms