RNA–Protein interactions for RNA: ENST00000415283.1

LINC01066-201, Transcript of long intergenic non-protein coding RNA 1066, humanhuman

TSL 3 BASIC

Gene LINC01066, Length 399 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01066-201ENST00000415283 AEBP2Q6ZN18 517 aaPredicted RBP28.52■■■□□ 2.16
LINC01066-201ENST00000415283 CHIC1Q5VXU3 224 aa27.34■■□□□ 1.97
LINC01066-201ENST00000415283 SENP3Q9H4L4 574 aaPredicted RBP24.34■■□□□ 1.49
LINC01066-201ENST00000415283 PHF23Q9BUL5 403 aaPredicted RBP24.06■■□□□ 1.44
LINC01066-201ENST00000415283 FOXD1Q16676 465 aa22.64■■□□□ 1.21
LINC01066-201ENST00000415283 PLPPR3Q6T4P5 718 aa22■■□□□ 1.11
LINC01066-201ENST00000415283 ADRA2BP18089 450 aa21.34■■□□□ 1.01
LINC01066-201ENST00000415283 PPP6R1Q9UPN7 881 aa21.34■■□□□ 1.01
LINC01066-201ENST00000415283 PIAS4Q8N2W9 510 aaPredicted RBP21.26■□□□□ 0.99
LINC01066-201ENST00000415283 MSH5O43196 834 aa21.12■□□□□ 0.97
LINC01066-201ENST00000415283 POTEDQ86YR6 584 aa20.22■□□□□ 0.83
LINC01066-201ENST00000415283 SCAF1Q9H7N4 1312 aaKnown RBP19.57■□□□□ 0.72
LINC01066-201ENST00000415283 MAPK8IP2Q13387 824 aaPredicted RBP19.51■□□□□ 0.71
LINC01066-201ENST00000415283 PPP4R3CPQ6ZMV5 832 aa19.32■□□□□ 0.68
LINC01066-201ENST00000415283 DMRT2Q9Y5R5 561 aa19.32■□□□□ 0.68
LINC01066-201ENST00000415283 CNKSR2Q8WXI2 1034 aa18.89■□□□□ 0.61
LINC01066-201ENST00000415283 NCBP3Q53F19 620 aaKnown RBP18.69■□□□□ 0.58
LINC01066-201ENST00000415283 HOXD11P31277 338 aaPredicted RBP18.68■□□□□ 0.58
LINC01066-201ENST00000415283 DCAF8L1A6NGE4 600 aa18.65■□□□□ 0.58
LINC01066-201ENST00000415283 RNF216Q9NWF9 866 aaPredicted RBP18.64■□□□□ 0.57
LINC01066-201ENST00000415283 NPM3O75607 178 aaKnown RBP18.35■□□□□ 0.53
LINC01066-201ENST00000415283 KCNA4P22459 653 aa18.23■□□□□ 0.51
LINC01066-201ENST00000415283 NISCHQ9Y2I1 1504 aa18.15■□□□□ 0.5
LINC01066-201ENST00000415283 CACNB1Q02641 598 aaPredicted RBP18.03■□□□□ 0.48
LINC01066-201ENST00000415283 RNF39Q9H2S5 420 aa18.01■□□□□ 0.47
LINC01066-201ENST00000415283 DNAJC5BQ9UF47 199 aa17.95■□□□□ 0.46
LINC01066-201ENST00000415283 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.91■□□□□ 0.46
LINC01066-201ENST00000415283 C1QBPQ07021 282 aaKnown RBP17.78■□□□□ 0.44
LINC01066-201ENST00000415283 U3KPZ7 1027 aaPredicted RBP17.48■□□□□ 0.39
LINC01066-201ENST00000415283 SLC4A2P04920 1241 aa17.44■□□□□ 0.38
LINC01066-201ENST00000415283 SLC4A1APQ9BWU0 796 aaKnown RBP17.3■□□□□ 0.36
LINC01066-201ENST00000415283 CAPN15O75808 1086 aa17.2■□□□□ 0.34
LINC01066-201ENST00000415283 SPINK5Q9NQ38 1064 aaPredicted RBP17.18■□□□□ 0.34
LINC01066-201ENST00000415283 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.13■□□□□ 0.33
LINC01066-201ENST00000415283 HNRNPUL2Q1KMD3 747 aaKnown RBP17.13■□□□□ 0.33
LINC01066-201ENST00000415283 APLP2Q06481 763 aa17.1■□□□□ 0.33
LINC01066-201ENST00000415283 SAMD1Q6SPF0 538 aaPredicted RBP17.03■□□□□ 0.32
LINC01066-201ENST00000415283 MYCNP04198 464 aaPredicted RBP16.99■□□□□ 0.31
LINC01066-201ENST00000415283 TRHP20396 242 aaPredicted RBP16.99■□□□□ 0.31
LINC01066-201ENST00000415283 DSG3P32926 999 aa16.96■□□□□ 0.31
LINC01066-201ENST00000415283 FOXD4L1Q9NU39 408 aa16.94■□□□□ 0.3
LINC01066-201ENST00000415283 ZNF219Q9P2Y4 722 aaPredicted RBP16.92■□□□□ 0.3
LINC01066-201ENST00000415283 ABCB7O75027 752 aa16.8■□□□□ 0.28
LINC01066-201ENST00000415283 ZBTB22O15209 634 aa16.72■□□□□ 0.27
LINC01066-201ENST00000415283 POLA2Q14181 598 aa16.56■□□□□ 0.24
LINC01066-201ENST00000415283 ATF5Q9Y2D1 282 aaPredicted RBP16.56■□□□□ 0.24
LINC01066-201ENST00000415283 ATXN8OSP0DMR3 200 aa16.38■□□□□ 0.21
LINC01066-201ENST00000415283 ZBTB12Q9Y330 459 aaPredicted RBP16.24■□□□□ 0.19
LINC01066-201ENST00000415283 RBM42Q9BTD8 480 aaKnown RBP16.22■□□□□ 0.19
LINC01066-201ENST00000415283 CSRNP3Q8WYN3 585 aa16.21■□□□□ 0.19
LINC01066-201ENST00000415283 EHMT2Q96KQ7 1210 aa16.21■□□□□ 0.19
LINC01066-201ENST00000415283 OSCARQ8IYS5 282 aa15.99■□□□□ 0.15
LINC01066-201ENST00000415283 FBLN2P98095 1184 aa15.98■□□□□ 0.15
LINC01066-201ENST00000415283 POTEHQ6S545 545 aa15.9■□□□□ 0.14
LINC01066-201ENST00000415283 AKT1S1Q96B36 256 aa15.88■□□□□ 0.13
LINC01066-201ENST00000415283 MKRN4PQ13434 485 aaPredicted RBP15.79■□□□□ 0.12
LINC01066-201ENST00000415283 CHRDL2Q6WN34 429 aa15.75■□□□□ 0.11
LINC01066-201ENST00000415283 REM2Q8IYK8 340 aaPredicted RBP15.74■□□□□ 0.11
LINC01066-201ENST00000415283 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
LINC01066-201ENST00000415283 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
LINC01066-201ENST00000415283 SPDYE2Q495Y8 402 aa15.73■□□□□ 0.11
LINC01066-201ENST00000415283 CCDC180Q9P1Z9 1646 aa15.72■□□□□ 0.11
LINC01066-201ENST00000415283 ZNF692Q9BU19 519 aaPredicted RBP15.63■□□□□ 0.09
LINC01066-201ENST00000415283 PITPNM1O00562 1244 aa15.55■□□□□ 0.08
LINC01066-201ENST00000415283 SSUH2Q9Y2M2 353 aa15.5■□□□□ 0.07
LINC01066-201ENST00000415283 CLEC11AQ9Y240 323 aa15.44■□□□□ 0.06
LINC01066-201ENST00000415283 SPDYE1Q8NFV5 336 aaPredicted RBP15.43■□□□□ 0.06
LINC01066-201ENST00000415283 PIP4P2Q8N4L2 257 aa15.42■□□□□ 0.06
LINC01066-201ENST00000415283 PABPN1Q86U42 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
LINC01066-201ENST00000415283 FXR2P51116 673 aaKnown RBP eCLIP15.34■□□□□ 0.05
LINC01066-201ENST00000415283 ZCCHC6Q5VYS8 1495 aaKnown RBP15.3■□□□□ 0.04
LINC01066-201ENST00000415283 SPDYE4A6NLX3 237 aa15.24■□□□□ 0.03
LINC01066-201ENST00000415283 PRR29P0C7W0 189 aa15.2■□□□□ 0.02
LINC01066-201ENST00000415283 PRKAR2AP13861 404 aaKnown RBP15.19■□□□□ 0.02
LINC01066-201ENST00000415283 HAX1O00165 279 aa15.15■□□□□ 0.02
LINC01066-201ENST00000415283 CHADLQ6NUI6 762 aa15.07■□□□□ 0
LINC01066-201ENST00000415283 DCAF1Q9Y4B6 1507 aa15.03■□□□□ -0
LINC01066-201ENST00000415283 STAG3Q9UJ98 1225 aa15.03■□□□□ -0
LINC01066-201ENST00000415283 SP7Q8TDD2 431 aaPredicted RBP15□□□□□ -0.01
LINC01066-201ENST00000415283 SHROOM4Q9ULL8 1493 aa14.89□□□□□ -0.03
LINC01066-201ENST00000415283 EVX2Q03828 476 aa14.89□□□□□ -0.03
LINC01066-201ENST00000415283 FARP1Q9Y4F1 1045 aaPredicted RBP14.86□□□□□ -0.03
LINC01066-201ENST00000415283 C19orf67A6NJJ6 358 aa14.84□□□□□ -0.03
LINC01066-201ENST00000415283 DCAF8L2P0C7V8 631 aa14.81□□□□□ -0.04
LINC01066-201ENST00000415283 CREBZFQ9NS37 354 aa14.81□□□□□ -0.04
LINC01066-201ENST00000415283 PROM2Q8N271 834 aa14.79□□□□□ -0.04
LINC01066-201ENST00000415283 MYO15BQ96JP2 1530 aa14.77□□□□□ -0.04
LINC01066-201ENST00000415283 FKBP8Q14318 412 aa14.75□□□□□ -0.05
LINC01066-201ENST00000415283 CD44P16070 742 aaKnown RBP14.72□□□□□ -0.05
LINC01066-201ENST00000415283 ABCC9O60706 1549 aa14.64□□□□□ -0.07
LINC01066-201ENST00000415283 NPM1P06748 294 aaKnown RBP eCLIP14.61□□□□□ -0.07
LINC01066-201ENST00000415283 GABBR2O75899 941 aa14.6□□□□□ -0.07
LINC01066-201ENST00000415283 NACADO15069 1562 aa14.59□□□□□ -0.07
LINC01066-201ENST00000415283 ZRANB1Q9UGI0 708 aa14.58□□□□□ -0.08
LINC01066-201ENST00000415283 PLEKHG5O94827 1062 aa14.56□□□□□ -0.08
LINC01066-201ENST00000415283 MIER1Q8N108 512 aa14.56□□□□□ -0.08
LINC01066-201ENST00000415283 PAK3O75914 559 aaPredicted RBP14.54□□□□□ -0.08
LINC01066-201ENST00000415283 MNX1P50219 401 aaPredicted RBP14.54□□□□□ -0.08
LINC01066-201ENST00000415283 PLCD3Q8N3E9 789 aa14.48□□□□□ -0.09
LINC01066-201ENST00000415283 SCRIBQ14160 1630 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms