Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC8.38□□□□□ -1.07
SNED1Q8TER0 GLYATL1P2-202ENST00000588046 902 ntBASIC8.38□□□□□ -1.07
SNED1Q8TER0 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC8.38□□□□□ -1.07
SNED1Q8TER0 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC8.38□□□□□ -1.07
SNED1Q8TER0 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
SNED1Q8TER0 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNED1Q8TER0 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNED1Q8TER0 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC8.38□□□□□ -1.07
SNED1Q8TER0 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
SNED1Q8TER0 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC8.38□□□□□ -1.07
SNED1Q8TER0 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SNED1Q8TER0 AL121949.2-201ENST00000403446 1548 ntBASIC8.38□□□□□ -1.07
SNED1Q8TER0 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
SNED1Q8TER0 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
SNED1Q8TER0 DLEU2L-201ENST00000371086 3555 ntBASIC8.38□□□□□ -1.07
SNED1Q8TER0 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
SNED1Q8TER0 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
SNED1Q8TER0 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SNED1Q8TER0 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC8.38□□□□□ -1.07
SNED1Q8TER0 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 RNA5SP77-201ENST00000365394 120 ntBASIC8.37□□□□□ -1.07
SNED1Q8TER0 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 AL035422.1-201ENST00000414193 397 ntBASIC8.37□□□□□ -1.07
SNED1Q8TER0 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 KRTAP3-4P-201ENST00000430780 280 ntBASIC8.37□□□□□ -1.07
SNED1Q8TER0 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 PFN1P11-201ENST00000445829 389 ntBASIC8.37□□□□□ -1.07
SNED1Q8TER0 AL020997.1-201ENST00000446554 349 ntBASIC8.37□□□□□ -1.07
SNED1Q8TER0 VNN3-210ENST00000450865 596 ntTSL 4 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 AC113367.2-201ENST00000505749 160 ntBASIC8.37□□□□□ -1.07
SNED1Q8TER0 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 AC093283.1-201ENST00000565306 1075 ntBASIC8.37□□□□□ -1.07
SNED1Q8TER0 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 AL365181.4-201ENST00000609800 547 ntBASIC8.37□□□□□ -1.07
SNED1Q8TER0 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 AC130456.6-201ENST00000623745 765 ntBASIC8.37□□□□□ -1.07
SNED1Q8TER0 AP001962.1-201ENST00000624114 559 ntBASIC8.37□□□□□ -1.07
SNED1Q8TER0 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 C10orf25-201ENST00000625168 3078 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 POTEH-AS1-201ENST00000422014 2566 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 PSMC1P6-201ENST00000477233 1319 ntBASIC8.37□□□□□ -1.07
SNED1Q8TER0 GTF2IRD2P1-201ENST00000449689 2749 ntBASIC8.37□□□□□ -1.07
SNED1Q8TER0 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 SNORA70.3-201ENST00000365075 132 ntBASIC8.37□□□□□ -1.07
SNED1Q8TER0 RPL24P7-201ENST00000399435 453 ntBASIC8.37□□□□□ -1.07
SNED1Q8TER0 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 PRELID1P2-201ENST00000407805 396 ntBASIC8.37□□□□□ -1.07
SNED1Q8TER0 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 PRDX1P1-201ENST00000449329 596 ntBASIC8.37□□□□□ -1.07
SNED1Q8TER0 PDE4DIP-208ENST00000464103 1055 ntTSL 5 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
SNED1Q8TER0 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC8.37□□□□□ -1.07
SNED1Q8TER0 AC020914.7-201ENST00000594477 545 ntBASIC8.37□□□□□ -1.07
SNED1Q8TER0 SMIM12P1-201ENST00000603004 274 ntBASIC8.37□□□□□ -1.07
SNED1Q8TER0 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC8.36□□□□□ -1.07
SNED1Q8TER0 LINC00506-203ENST00000629295 4300 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SNED1Q8TER0 AC018992.1-201ENST00000523778 2149 ntBASIC8.36□□□□□ -1.07
SNED1Q8TER0 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNED1Q8TER0 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
SNED1Q8TER0 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNED1Q8TER0 RUNX1T1-248ENST00000613302 7687 ntAPPRIS P3 TSL 5 BASIC8.36□□□□□ -1.07
SNED1Q8TER0 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
SNED1Q8TER0 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms