Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
APOEP02649 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.41□□□□□ -1.22
APOEP02649 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
APOEP02649 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC7.41□□□□□ -1.22
APOEP02649 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
APOEP02649 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
APOEP02649 SUMO2P13-201ENST00000403109 272 ntBASIC7.41□□□□□ -1.22
APOEP02649 AL662791.3-201ENST00000413771 776 ntBASIC7.41□□□□□ -1.22
APOEP02649 VDAC1P10-201ENST00000416715 891 ntBASIC7.41□□□□□ -1.22
APOEP02649 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC7.41□□□□□ -1.22
APOEP02649 HNRNPA1P30-201ENST00000424329 751 ntTSL 3 BASIC7.41□□□□□ -1.22
APOEP02649 AL158214.1-201ENST00000444423 404 ntBASIC7.41□□□□□ -1.22
APOEP02649 GAPDHP16-201ENST00000448152 962 ntBASIC7.41□□□□□ -1.22
APOEP02649 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.41□□□□□ -1.22
APOEP02649 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC7.41□□□□□ -1.22
APOEP02649 RN7SL325P-201ENST00000460434 283 ntBASIC7.41□□□□□ -1.22
APOEP02649 AC091982.1-202ENST00000473923 343 ntBASIC7.41□□□□□ -1.22
APOEP02649 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC7.41□□□□□ -1.22
APOEP02649 AL591122.1-201ENST00000487348 492 ntBASIC7.41□□□□□ -1.22
APOEP02649 AC073648.3-201ENST00000504939 925 ntBASIC7.41□□□□□ -1.22
APOEP02649 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.41□□□□□ -1.22
APOEP02649 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
APOEP02649 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC7.41□□□□□ -1.22
APOEP02649 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
APOEP02649 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.41□□□□□ -1.22
APOEP02649 MIR3135A-201ENST00000578460 77 ntBASIC7.41□□□□□ -1.22
APOEP02649 AC092032.1-201ENST00000603090 165 ntBASIC7.41□□□□□ -1.22
APOEP02649 AC104184.1-201ENST00000607513 721 ntBASIC7.41□□□□□ -1.22
APOEP02649 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
APOEP02649 AC007347.2-201ENST00000623044 180 ntBASIC7.41□□□□□ -1.22
APOEP02649 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.41□□□□□ -1.22
APOEP02649 CASC19-232ENST00000641480 1244 ntBASIC7.41□□□□□ -1.22
APOEP02649 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
APOEP02649 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
APOEP02649 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
APOEP02649 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
APOEP02649 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.41□□□□□ -1.22
APOEP02649 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
APOEP02649 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
APOEP02649 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
APOEP02649 ZMYND11-216ENST00000602682 1687 ntTSL 5 BASIC7.41□□□□□ -1.22
APOEP02649 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
APOEP02649 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.41□□□□□ -1.22
APOEP02649 NCOA4P3-201ENST00000513203 1877 ntBASIC7.41□□□□□ -1.22
APOEP02649 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
APOEP02649 YES1-203ENST00000577961 4554 ntTSL 5 BASIC7.4□□□□□ -1.22
APOEP02649 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
APOEP02649 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
APOEP02649 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
APOEP02649 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
APOEP02649 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
APOEP02649 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
APOEP02649 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.22
APOEP02649 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
APOEP02649 AL162171.3-201ENST00000617439 3178 ntBASIC7.4□□□□□ -1.22
APOEP02649 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
APOEP02649 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
APOEP02649 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
APOEP02649 RNU6-1017P-201ENST00000363613 106 ntBASIC7.4□□□□□ -1.22
APOEP02649 AC074375.1-201ENST00000372993 192 ntBASIC7.4□□□□□ -1.22
APOEP02649 RNA5SP35-201ENST00000391257 129 ntBASIC7.4□□□□□ -1.22
APOEP02649 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC7.4□□□□□ -1.22
APOEP02649 RN7SKP254-201ENST00000410685 310 ntBASIC7.4□□□□□ -1.22
APOEP02649 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC7.4□□□□□ -1.22
APOEP02649 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
APOEP02649 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC7.4□□□□□ -1.22
APOEP02649 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
APOEP02649 OR52S1P-201ENST00000427016 937 ntBASIC7.4□□□□□ -1.22
APOEP02649 AL121916.1-201ENST00000429405 308 ntBASIC7.4□□□□□ -1.22
APOEP02649 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC7.4□□□□□ -1.22
APOEP02649 BX323845.2-201ENST00000458382 234 ntBASIC7.4□□□□□ -1.22
APOEP02649 RPSAP48-201ENST00000466509 889 ntBASIC7.4□□□□□ -1.22
APOEP02649 AP005202.1-201ENST00000489915 867 ntBASIC7.4□□□□□ -1.22
APOEP02649 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.4□□□□□ -1.22
APOEP02649 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC7.4□□□□□ -1.22
APOEP02649 AP001646.2-201ENST00000528645 1156 ntBASIC7.4□□□□□ -1.22
APOEP02649 OR4A1P-201ENST00000532342 920 ntBASIC7.4□□□□□ -1.22
APOEP02649 AL049840.6-202ENST00000603373 279 ntBASIC7.4□□□□□ -1.22
APOEP02649 AL450226.2-201ENST00000622913 439 ntBASIC7.4□□□□□ -1.22
APOEP02649 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC7.4□□□□□ -1.22
APOEP02649 AC026108.1-201ENST00000635444 547 ntBASIC7.4□□□□□ -1.22
APOEP02649 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
APOEP02649 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC7.4□□□□□ -1.22
APOEP02649 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
APOEP02649 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.4□□□□□ -1.22
APOEP02649 CDY7P-201ENST00000429883 1604 ntBASIC7.4□□□□□ -1.22
APOEP02649 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
APOEP02649 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
APOEP02649 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
APOEP02649 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
APOEP02649 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
APOEP02649 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
APOEP02649 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.4□□□□□ -1.23
APOEP02649 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.4□□□□□ -1.23
APOEP02649 AC022819.1-201ENST00000563495 3910 ntBASIC7.39□□□□□ -1.23
APOEP02649 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
APOEP02649 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
APOEP02649 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
APOEP02649 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
APOEP02649 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms