Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC239367.3-201ENST00000428996 814 ntBASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 APPL2-203ENST00000546731 684 ntTSL 2 BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 AL512652.1-201ENST00000619006 500 ntBASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 TIAM2-202ENST00000318981 5916 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 CELF2-205ENST00000542579 7982 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 AC004947.1-201ENST00000420912 2781 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 WIPF2-201ENST00000323571 7474 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 BTAF1-201ENST00000265990 7250 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 LINC01910-201ENST00000582251 2637 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 PTAFR-203ENST00000539896 4191 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 LINC01915-201ENST00000577994 2321 ntTSL 2 BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 ORC2-201ENST00000234296 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
RIMBP3Q9UFD9 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 PUS7L-202ENST00000416848 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 ERICH3-201ENST00000326665 7159 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 CDK5RAP2-203ENST00000360822 5551 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 IGKV1OR2-3-201ENST00000411475 288 ntBASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 SDHDP6-201ENST00000414693 480 ntBASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 AL445665.1-202ENST00000452436 324 ntBASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 AC095052.1-201ENST00000509955 863 ntBASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 AL589674.2-201ENST00000604304 337 ntBASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 AC004808.2-201ENST00000627965 773 ntBASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 SLC12A3-203ENST00000563236 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 RGPD2-201ENST00000398146 6931 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 LAMC2-204ENST00000493293 4313 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 ERMAP-203ENST00000372517 3423 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 ZNF259P1-202ENST00000572422 4912 ntBASIC10.63□□□□□ -0.71
RIMBP3Q9UFD9 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 OR52K3P-202ENST00000641797 1729 ntBASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 CABYR-202ENST00000399481 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 RN7SKP271-201ENST00000410528 320 ntBASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 LDHC-203ENST00000535809 757 ntTSL 5 BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 LDHC-205ENST00000537486 583 ntTSL 5 BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 MYL6-213ENST00000549017 502 ntTSL 3 BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 AC104695.2-201ENST00000605056 775 ntBASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 ZSCAN30-211ENST00000610712 3439 ntTSL 4 BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 ZNF608-203ENST00000504926 4726 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 GREB1L-209ENST00000580732 8749 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 AMMECR1L-202ENST00000393001 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 RPL37P18-201ENST00000411602 243 ntBASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 NPM1P4-201ENST00000414095 812 ntBASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 AL663061.1-201ENST00000416625 580 ntBASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 RPL17P17-201ENST00000419491 557 ntBASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 EIF2S2P3-201ENST00000428356 999 ntBASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 PAICSP2-201ENST00000429118 1150 ntBASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 PCBP2P1-201ENST00000437262 977 ntBASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 AL645936.1-201ENST00000441979 518 ntBASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 DNAJB5P1-201ENST00000454004 806 ntBASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 SMARCA2-258ENST00000637103 5657 ntTSL 5 BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 TPT1-214ENST00000616577 4814 ntTSL 3 BASIC10.62□□□□□ -0.71
RIMBP3Q9UFD9 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RIMBP3Q9UFD9 RRP12-203ENST00000414986 4242 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.71
RIMBP3Q9UFD9 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC10.61□□□□□ -0.71
RIMBP3Q9UFD9 AC008627.1-201ENST00000517511 1704 ntBASIC10.61□□□□□ -0.71
RIMBP3Q9UFD9 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RIMBP3Q9UFD9 COL4A6-202ENST00000372216 6570 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
RIMBP3Q9UFD9 CACNA1C-225ENST00000480911 6811 ntTSL 5 BASIC10.61□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms