Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 AL121949.2-201ENST00000403446 1548 ntBASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 MEST-203ENST00000378576 2180 ntTSL 5 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 CREM-216ENST00000429130 1476 ntTSL 5 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 SF3A3P1-201ENST00000446317 1477 ntBASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 FMO10P-201ENST00000455032 1493 ntBASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 TAAR8-201ENST00000275200 1029 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 RNU6-697P-201ENST00000363348 107 ntBASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 RNA5SP333-201ENST00000363466 118 ntBASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 RNA5SP334-201ENST00000364825 118 ntBASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 MIR106B-201ENST00000385301 82 ntBASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 MIR541-201ENST00000401360 84 ntBASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 TDGF1P4-201ENST00000401555 520 ntBASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 YBX1P8-201ENST00000421881 943 ntBASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 AL117338.1-201ENST00000434552 631 ntTSL 5 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 AC015820.1-201ENST00000473882 321 ntBASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 ATP6V1G1P2-201ENST00000522436 346 ntBASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 AC110056.1-201ENST00000525759 911 ntBASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 AP005597.3-201ENST00000532369 799 ntBASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 AC244502.1-205ENST00000535351 571 ntTSL 4 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 AC016144.1-201ENST00000548175 1087 ntBASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 AC092718.5-201ENST00000562450 593 ntTSL 5 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 AC118757.1-202ENST00000589074 609 ntTSL 2 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 AC011465.1-201ENST00000599092 328 ntTSL 3 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 AC122710.3-201ENST00000606566 541 ntBASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 AC007663.4-201ENST00000608275 631 ntBASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 LINC01176-202ENST00000628121 716 ntTSL 3 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 SYTL2-228ENST00000533892 1441 ntTSL 2 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.32□□□□□ -1.24
HMGB1P1B2RPK0 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 ZNF449-202ENST00000370761 2051 ntTSL 2 BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 SYCP3-201ENST00000266743 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 FUNDC2P3-201ENST00000334716 533 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 HSPB1P1-201ENST00000423240 256 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 RPL7P7-201ENST00000428803 703 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 AC104698.1-201ENST00000435671 276 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 RN7SL302P-201ENST00000475999 300 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 RN7SL259P-201ENST00000478499 253 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 IGKV1-39-201ENST00000498574 398 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 MTND6P8-201ENST00000503471 522 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 AC026782.2-201ENST00000510845 636 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 OR4A42P-201ENST00000531397 938 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 AC090092.1-202ENST00000533591 685 ntTSL 5 BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 AC007751.2-201ENST00000534173 291 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 AC012038.1-201ENST00000551279 552 ntTSL 4 BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 TUBAP4-201ENST00000569261 416 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 AC067852.5-201ENST00000589299 310 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 AC009303.3-201ENST00000591103 736 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 RPL12P41-201ENST00000599500 498 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 OR7A18P-201ENST00000600416 277 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 AC138473.1-201ENST00000605717 526 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 AL021807.1-201ENST00000607175 565 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 AC002470.1-201ENST00000610278 395 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 AC020910.4-201ENST00000612269 540 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 AC098590.2-201ENST00000614787 281 ntBASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 KRTAP7-1-201ENST00000621162 721 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
HMGB1P1B2RPK0 NR1I3-235ENST00000628566 1201 ntTSL 5 BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms