Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC108114.1-201ENST00000477321 437 ntBASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 IAH1-205ENST00000482918 863 ntTSL 3 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 AC010374.1-201ENST00000503762 1237 ntBASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 AC106774.1-201ENST00000515105 321 ntBASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 AC138938.1-201ENST00000515431 782 ntBASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 RPS20-204ENST00000519606 424 ntTSL 3 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 AHI1-217ENST00000534469 680 ntTSL 3 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 AP002892.2-201ENST00000544195 560 ntTSL 4 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 AC063947.2-201ENST00000547000 1256 ntBASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 AC090115.2-201ENST00000548060 883 ntBASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 AC073896.2-201ENST00000549565 399 ntTSL 2 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 TMEM106C-219ENST00000552546 742 ntTSL 4 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 AC104261.1-202ENST00000557946 509 ntTSL 3 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 AC104261.1-201ENST00000560203 392 ntTSL 3 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 RPL17-212ENST00000581373 584 ntTSL 2 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 GLUD1P2-201ENST00000583339 201 ntBASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 AC080037.1-201ENST00000584975 889 ntTSL 3 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 GLUD1P8-201ENST00000585063 203 ntBASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 PRKAR1A-214ENST00000588188 1209 ntTSL 3 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 AL691432.1-202ENST00000597891 502 ntBASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 AC018737.1-201ENST00000603900 204 ntBASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 AC084036.1-201ENST00000609190 508 ntBASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 GLULP5-201ENST00000547831 1390 ntBASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 AC105233.5-202ENST00000642083 4132 ntBASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 MATR3-229ENST00000361059 3970 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 RNF146-210ENST00000608991 2169 ntAPPRIS P3 TSL 4 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC8.55□□□□□ -1.04
FOXR1Q6PIV2 SCHLAP1-201ENST00000629145 1436 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 MCM3AP-AS1-201ENST00000414659 2539 ntTSL 2 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 C9orf131-205ENST00000421362 3259 ntAPPRIS ALT2 TSL 4 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC104162.1-201ENST00000430831 2382 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 CYP2C18-202ENST00000339022 1471 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 RNA5SP74-201ENST00000363538 109 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 RIT1-201ENST00000368322 855 ntTSL 3 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 RAD51B-201ENST00000390683 922 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 CNN2P7-201ENST00000400583 932 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 USP9YP33-201ENST00000412220 421 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 IPMKP1-201ENST00000425988 855 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC093422.3-201ENST00000428506 305 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AL589990.1-201ENST00000432210 592 ntTSL 3 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 GAPDHP75-201ENST00000433910 943 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AL117338.1-201ENST00000434552 631 ntTSL 5 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 RPS7P2-201ENST00000435134 607 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC018641.1-201ENST00000435950 796 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 CHCHD4P5-201ENST00000436684 427 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 RPL7L1P11-201ENST00000446092 721 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC023137.1-201ENST00000448241 308 ntTSL 4 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AMD1P1-201ENST00000457220 922 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 RPL10AP3-201ENST00000462503 651 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 KCNAB1-AS1-201ENST00000467794 456 ntTSL 2 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 CTLA4-204ENST00000472206 277 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 LINC02006-203ENST00000493214 812 ntTSL 2 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 PAX8-211ENST00000497038 816 ntTSL 5 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC008667.3-201ENST00000506892 553 ntTSL 4 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 AC097522.1-201ENST00000507811 1042 ntBASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 SNCA-211ENST00000508895 905 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
FOXR1Q6PIV2 LEF1-AS1-206ENST00000512129 430 ntTSL 3 BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms