Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 AL445193.2-201ENST00000419596 620 ntTSL 3 BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 TRBV29OR9-2-201ENST00000427589 333 ntBASIC8.42□□□□□ -1.06
PDS5AQ29RF7 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 AL034399.1-201ENST00000451535 380 ntBASIC8.42□□□□□ -1.06
PDS5AQ29RF7 RPS3AP49-201ENST00000472161 790 ntBASIC8.42□□□□□ -1.06
PDS5AQ29RF7 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 SNRPCP11-201ENST00000492453 205 ntBASIC8.42□□□□□ -1.06
PDS5AQ29RF7 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 AC112225.1-201ENST00000508230 297 ntBASIC8.42□□□□□ -1.06
PDS5AQ29RF7 NREP-217ENST00000509025 987 ntTSL 3 BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 NREP-223ENST00000515855 801 ntTSL 4 BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 PTTG3P-201ENST00000521862 606 ntBASIC8.42□□□□□ -1.06
PDS5AQ29RF7 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 AC010463.3-201ENST00000594077 500 ntBASIC8.42□□□□□ -1.06
PDS5AQ29RF7 MIR6849-201ENST00000618543 69 ntBASIC8.42□□□□□ -1.06
PDS5AQ29RF7 AC025287.2-201ENST00000621911 668 ntBASIC8.42□□□□□ -1.06
PDS5AQ29RF7 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 AL023806.3-201ENST00000638502 2704 ntBASIC8.42□□□□□ -1.06
PDS5AQ29RF7 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 NCOA4-204ENST00000581486 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PDS5AQ29RF7 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 AL512329.1-201ENST00000404600 1592 ntBASIC8.41□□□□□ -1.06
PDS5AQ29RF7 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 PRIM2-207ENST00000615550 2308 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 AL590762.1-201ENST00000391782 432 ntBASIC8.41□□□□□ -1.06
PDS5AQ29RF7 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 UBQLN1P1-207ENST00000441056 1169 ntBASIC8.41□□□□□ -1.06
PDS5AQ29RF7 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 RN7SL390P-201ENST00000470634 284 ntBASIC8.41□□□□□ -1.06
PDS5AQ29RF7 RN7SL379P-201ENST00000479912 293 ntBASIC8.41□□□□□ -1.06
PDS5AQ29RF7 RN7SKP64-201ENST00000517206 328 ntBASIC8.41□□□□□ -1.06
PDS5AQ29RF7 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 CHEK2P2-201ENST00000554701 672 ntBASIC8.41□□□□□ -1.06
PDS5AQ29RF7 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 GOLGA6L5P-203ENST00000559768 578 ntTSL 4 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 ULK4P1-202ENST00000565174 503 ntBASIC8.41□□□□□ -1.06
PDS5AQ29RF7 DIMT1P1-201ENST00000603970 763 ntBASIC8.41□□□□□ -1.06
PDS5AQ29RF7 NQO2-209ENST00000606474 470 ntTSL 3 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 AC079949.2-201ENST00000617117 2933 ntBASIC8.41□□□□□ -1.06
PDS5AQ29RF7 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 AC091544.5-201ENST00000620192 3815 ntBASIC8.41□□□□□ -1.06
PDS5AQ29RF7 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.41□□□□□ -1.06
PDS5AQ29RF7 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
PDS5AQ29RF7 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PDS5AQ29RF7 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PDS5AQ29RF7 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PDS5AQ29RF7 APP-206ENST00000359726 3294 ntTSL 2 BASIC8.4□□□□□ -1.06
PDS5AQ29RF7 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC8.4□□□□□ -1.06
PDS5AQ29RF7 ABCC4-201ENST00000376887 5839 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PDS5AQ29RF7 DNMBP-203ENST00000543621 4178 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PDS5AQ29RF7 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PDS5AQ29RF7 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
PDS5AQ29RF7 AC020658.2-201ENST00000559030 4020 ntBASIC8.4□□□□□ -1.06
PDS5AQ29RF7 AC010894.1-201ENST00000313760 361 ntBASIC8.4□□□□□ -1.06
PDS5AQ29RF7 SNORD94-201ENST00000386037 137 ntBASIC8.4□□□□□ -1.06
PDS5AQ29RF7 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
PDS5AQ29RF7 AL136100.1-201ENST00000407696 330 ntBASIC8.4□□□□□ -1.06
PDS5AQ29RF7 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC8.4□□□□□ -1.06
PDS5AQ29RF7 Z82198.3-201ENST00000421145 199 ntBASIC8.4□□□□□ -1.06
PDS5AQ29RF7 AC022080.2-201ENST00000452932 533 ntBASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms