Protein–RNA interactions for Protein: P49336

CDK8, Cyclin-dependent kinase 8, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK8P49336 AC126177.6-201ENST00000550420 1009 ntBASIC8.63□□□□□ -1.03
CDK8P49336 BMS1P15-201ENST00000554269 1141 ntBASIC8.63□□□□□ -1.03
CDK8P49336 AC015911.5-201ENST00000587076 451 ntBASIC8.63□□□□□ -1.03
CDK8P49336 AC016747.2-203ENST00000606876 289 ntTSL 3 BASIC8.63□□□□□ -1.03
CDK8P49336 AP001033.2-201ENST00000609701 1003 ntBASIC8.63□□□□□ -1.03
CDK8P49336 PTCHD3P1-201ENST00000612350 537 ntBASIC8.63□□□□□ -1.03
CDK8P49336 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC8.63□□□□□ -1.03
CDK8P49336 AC025162.2-201ENST00000619602 560 ntBASIC8.63□□□□□ -1.03
CDK8P49336 AC078909.2-201ENST00000620584 398 ntBASIC8.63□□□□□ -1.03
CDK8P49336 AC117503.3-201ENST00000623811 601 ntBASIC8.63□□□□□ -1.03
CDK8P49336 AC099667.1-201ENST00000624222 469 ntBASIC8.63□□□□□ -1.03
CDK8P49336 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDK8P49336 AC025040.2-201ENST00000558657 1852 ntBASIC8.63□□□□□ -1.03
CDK8P49336 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDK8P49336 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDK8P49336 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDK8P49336 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDK8P49336 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CDK8P49336 XRCC6P5-201ENST00000435236 1795 ntBASIC8.63□□□□□ -1.03
CDK8P49336 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDK8P49336 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDK8P49336 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
CDK8P49336 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDK8P49336 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC8.62□□□□□ -1.03
CDK8P49336 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDK8P49336 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
CDK8P49336 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDK8P49336 STN1-202ENST00000369764 1311 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CDK8P49336 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDK8P49336 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDK8P49336 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDK8P49336 PPIAP22-201ENST00000358455 498 ntBASIC8.62□□□□□ -1.03
CDK8P49336 RNA5SP218-201ENST00000363188 109 ntBASIC8.62□□□□□ -1.03
CDK8P49336 RNU6-609P-201ENST00000365459 107 ntBASIC8.62□□□□□ -1.03
CDK8P49336 AL450313.1-201ENST00000366376 452 ntTSL 3 BASIC8.62□□□□□ -1.03
CDK8P49336 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC8.62□□□□□ -1.03
CDK8P49336 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CDK8P49336 AL139100.1-201ENST00000408001 498 ntBASIC8.62□□□□□ -1.03
CDK8P49336 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDK8P49336 RNU6-564P-201ENST00000410983 104 ntBASIC8.62□□□□□ -1.03
CDK8P49336 AL662791.3-201ENST00000413771 776 ntBASIC8.62□□□□□ -1.03
CDK8P49336 PCNPP4-201ENST00000414817 517 ntBASIC8.62□□□□□ -1.03
CDK8P49336 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CDK8P49336 AC073508.1-201ENST00000428866 656 ntBASIC8.62□□□□□ -1.03
CDK8P49336 AL592114.2-201ENST00000440142 532 ntBASIC8.62□□□□□ -1.03
CDK8P49336 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC8.62□□□□□ -1.03
CDK8P49336 RPS7P4-201ENST00000444127 582 ntBASIC8.62□□□□□ -1.03
CDK8P49336 RN7SL149P-201ENST00000465197 281 ntBASIC8.62□□□□□ -1.03
CDK8P49336 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC8.62□□□□□ -1.03
CDK8P49336 RN7SL775P-201ENST00000498361 336 ntBASIC8.62□□□□□ -1.03
CDK8P49336 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CDK8P49336 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC8.62□□□□□ -1.03
CDK8P49336 AP001646.2-201ENST00000528645 1156 ntBASIC8.62□□□□□ -1.03
CDK8P49336 AC135279.1-201ENST00000543493 504 ntBASIC8.62□□□□□ -1.03
CDK8P49336 AC091515.1-201ENST00000548110 679 ntBASIC8.62□□□□□ -1.03
CDK8P49336 NDUFA3P4-201ENST00000560814 250 ntBASIC8.62□□□□□ -1.03
CDK8P49336 AC106785.3-201ENST00000564064 847 ntBASIC8.62□□□□□ -1.03
CDK8P49336 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC8.62□□□□□ -1.03
CDK8P49336 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC8.62□□□□□ -1.03
CDK8P49336 MIR744-201ENST00000578242 98 ntBASIC8.62□□□□□ -1.03
CDK8P49336 RN7SL131P-201ENST00000579043 256 ntBASIC8.62□□□□□ -1.03
CDK8P49336 MIR378H-201ENST00000579966 83 ntBASIC8.62□□□□□ -1.03
CDK8P49336 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC8.62□□□□□ -1.03
CDK8P49336 AC005776.1-201ENST00000603164 290 ntBASIC8.62□□□□□ -1.03
CDK8P49336 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC8.62□□□□□ -1.03
CDK8P49336 AC097381.3-201ENST00000608962 462 ntBASIC8.62□□□□□ -1.03
CDK8P49336 AL121782.1-201ENST00000611242 413 ntBASIC8.62□□□□□ -1.03
CDK8P49336 AC098590.2-201ENST00000614787 281 ntBASIC8.62□□□□□ -1.03
CDK8P49336 AC009464.1-201ENST00000615731 469 ntBASIC8.62□□□□□ -1.03
CDK8P49336 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC8.62□□□□□ -1.03
CDK8P49336 AC243725.1-201ENST00000637164 436 ntBASIC8.62□□□□□ -1.03
CDK8P49336 AC106754.1-201ENST00000562632 1513 ntBASIC8.62□□□□□ -1.03
CDK8P49336 ACVR1-201ENST00000263640 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDK8P49336 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CDK8P49336 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDK8P49336 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC8.62□□□□□ -1.03
CDK8P49336 MAPK10-279ENST00000641157 2449 ntBASIC8.62□□□□□ -1.03
CDK8P49336 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDK8P49336 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CDK8P49336 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CDK8P49336 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC8.62□□□□□ -1.03
CDK8P49336 TTC3P1-201ENST00000399586 6081 ntBASIC8.62□□□□□ -1.03
CDK8P49336 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC8.62□□□□□ -1.03
CDK8P49336 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CDK8P49336 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CDK8P49336 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
CDK8P49336 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDK8P49336 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CDK8P49336 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDK8P49336 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDK8P49336 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.61□□□□□ -1.03
CDK8P49336 AC026464.2-201ENST00000567834 2421 ntBASIC8.61□□□□□ -1.03
CDK8P49336 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.61□□□□□ -1.03
CDK8P49336 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDK8P49336 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CDK8P49336 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CDK8P49336 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
CDK8P49336 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC8.61□□□□□ -1.03
CDK8P49336 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC8.61□□□□□ -1.03
CDK8P49336 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms