Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
POLR2AP24928 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
POLR2AP24928 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC8.12□□□□□ -1.11
POLR2AP24928 RAD51AP2-201ENST00000399080 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
POLR2AP24928 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
POLR2AP24928 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC8.12□□□□□ -1.11
POLR2AP24928 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
POLR2AP24928 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
POLR2AP24928 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
POLR2AP24928 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
POLR2AP24928 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
POLR2AP24928 BRD7P1-201ENST00000557705 1915 ntBASIC8.12□□□□□ -1.11
POLR2AP24928 ASAH1-227ENST00000636455 1777 ntTSL 5 BASIC8.12□□□□□ -1.11
POLR2AP24928 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
POLR2AP24928 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
POLR2AP24928 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
POLR2AP24928 AL603650.1-201ENST00000412680 240 ntBASIC8.11□□□□□ -1.11
POLR2AP24928 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
POLR2AP24928 RPL23AP28-201ENST00000448062 470 ntBASIC8.11□□□□□ -1.11
POLR2AP24928 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC8.11□□□□□ -1.11
POLR2AP24928 SCG5-207ENST00000497208 949 ntTSL 5 BASIC8.11□□□□□ -1.11
POLR2AP24928 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC8.11□□□□□ -1.11
POLR2AP24928 IGHV3-75-201ENST00000523951 358 ntBASIC8.11□□□□□ -1.11
POLR2AP24928 AC026956.1-201ENST00000558741 396 ntBASIC8.11□□□□□ -1.11
POLR2AP24928 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
POLR2AP24928 CDC42SE1-201ENST00000357235 3045 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
POLR2AP24928 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
POLR2AP24928 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC8.11□□□□□ -1.11
POLR2AP24928 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
POLR2AP24928 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC8.11□□□□□ -1.11
POLR2AP24928 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
POLR2AP24928 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC8.11□□□□□ -1.11
POLR2AP24928 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC8.11□□□□□ -1.11
POLR2AP24928 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
POLR2AP24928 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC8.11□□□□□ -1.11
POLR2AP24928 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
POLR2AP24928 EGFLAM-201ENST00000322350 4411 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
POLR2AP24928 OR51A10P-201ENST00000307165 937 ntBASIC8.11□□□□□ -1.11
POLR2AP24928 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC8.11□□□□□ -1.11
POLR2AP24928 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
POLR2AP24928 LARP1P1-201ENST00000407692 292 ntBASIC8.11□□□□□ -1.11
POLR2AP24928 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC8.11□□□□□ -1.11
POLR2AP24928 AC066692.1-201ENST00000421721 457 ntBASIC8.11□□□□□ -1.11
POLR2AP24928 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC8.11□□□□□ -1.11
POLR2AP24928 CBX1-205ENST00000495350 550 ntTSL 2 BASIC8.11□□□□□ -1.11
POLR2AP24928 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC8.11□□□□□ -1.11
POLR2AP24928 RGS5-220ENST00000528689 566 ntTSL 5 BASIC8.11□□□□□ -1.11
POLR2AP24928 AC079905.1-201ENST00000549280 475 ntBASIC8.11□□□□□ -1.11
POLR2AP24928 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC8.11□□□□□ -1.11
POLR2AP24928 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC8.11□□□□□ -1.11
POLR2AP24928 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC8.11□□□□□ -1.11
POLR2AP24928 AC007255.2-201ENST00000604053 631 ntBASIC8.11□□□□□ -1.11
POLR2AP24928 AC073529.1-202ENST00000608576 1080 ntTSL 5 BASIC8.11□□□□□ -1.11
POLR2AP24928 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC8.11□□□□□ -1.11
POLR2AP24928 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC8.11□□□□□ -1.11
POLR2AP24928 AC004491.1-201ENST00000623029 1882 ntBASIC8.11□□□□□ -1.11
POLR2AP24928 TMEM236-201ENST00000377495 5464 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
POLR2AP24928 AL121949.2-201ENST00000403446 1548 ntBASIC8.11□□□□□ -1.11
POLR2AP24928 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
POLR2AP24928 PIGN-230ENST00000638977 4601 ntTSL 5 BASIC8.11□□□□□ -1.11
POLR2AP24928 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
POLR2AP24928 SPIN3-211ENST00000638712 4286 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
POLR2AP24928 KARSP1-201ENST00000451871 1752 ntBASIC8.11□□□□□ -1.11
POLR2AP24928 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC8.11□□□□□ -1.11
POLR2AP24928 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
POLR2AP24928 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
POLR2AP24928 UTY-203ENST00000362096 4990 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
POLR2AP24928 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
POLR2AP24928 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
POLR2AP24928 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
POLR2AP24928 RPL12P13-201ENST00000310055 497 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 PPIAP24-201ENST00000328558 471 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
POLR2AP24928 RNA5SP77-201ENST00000365394 120 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 RNU6-1055P-201ENST00000391085 107 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 PSMA6P1-201ENST00000400275 741 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 OSTCP4-201ENST00000424397 449 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 PIP5K1P2-201ENST00000437005 1120 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC8.1□□□□□ -1.11
POLR2AP24928 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.1□□□□□ -1.11
POLR2AP24928 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
POLR2AP24928 AC018645.1-201ENST00000505003 109 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC8.1□□□□□ -1.11
POLR2AP24928 AC022960.2-201ENST00000616300 666 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 AP001264.1-201ENST00000620602 703 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
POLR2AP24928 SPATA31D5P-201ENST00000376459 4784 ntBASIC8.1□□□□□ -1.11
POLR2AP24928 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC8.1□□□□□ -1.11
POLR2AP24928 NRP1-212ENST00000432372 4137 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
POLR2AP24928 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
POLR2AP24928 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
POLR2AP24928 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
POLR2AP24928 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
POLR2AP24928 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
POLR2AP24928 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC8.1□□□□□ -1.11
POLR2AP24928 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
POLR2AP24928 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC8.1□□□□□ -1.11
POLR2AP24928 GPD2-202ENST00000409125 2661 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
POLR2AP24928 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
POLR2AP24928 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms