Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 OR7E94P-202ENST00000601375 790 ntBASIC9.31□□□□□ -0.92
ALDH1A1P00352 RPS28P1-201ENST00000604589 187 ntBASIC9.31□□□□□ -0.92
ALDH1A1P00352 DPRXP5-201ENST00000604662 539 ntBASIC9.31□□□□□ -0.92
ALDH1A1P00352 LINC00635-221ENST00000609366 784 ntTSL 5 BASIC9.31□□□□□ -0.92
ALDH1A1P00352 AC026367.2-201ENST00000610630 553 ntBASIC9.31□□□□□ -0.92
ALDH1A1P00352 AC073114.1-201ENST00000612027 490 ntBASIC9.31□□□□□ -0.92
ALDH1A1P00352 PART1_2.1-201ENST00000612397 250 ntBASIC9.31□□□□□ -0.92
ALDH1A1P00352 AC002094.4-201ENST00000613598 307 ntBASIC9.31□□□□□ -0.92
ALDH1A1P00352 AL121985.3-201ENST00000620690 523 ntBASIC9.31□□□□□ -0.92
ALDH1A1P00352 AC091953.4-201ENST00000625179 341 ntBASIC9.31□□□□□ -0.92
ALDH1A1P00352 MTND1P37-201ENST00000636562 264 ntBASIC9.31□□□□□ -0.92
ALDH1A1P00352 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
ALDH1A1P00352 C11orf70-201ENST00000434758 2193 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
ALDH1A1P00352 TDP1-202ENST00000393452 2370 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
ALDH1A1P00352 ADGRE1-205ENST00000450315 2567 ntTSL 2 BASIC9.31□□□□□ -0.92
ALDH1A1P00352 KIF2C-201ENST00000372217 2955 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
ALDH1A1P00352 RAB3GAP1-203ENST00000442034 4185 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
ALDH1A1P00352 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
ALDH1A1P00352 WRAP53-201ENST00000316024 4011 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALDH1A1P00352 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC9.31□□□□□ -0.92
ALDH1A1P00352 CSTF3-AS1-201ENST00000500025 2031 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
ALDH1A1P00352 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALDH1A1P00352 GLYAT-202ENST00000344743 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
ALDH1A1P00352 AC004158.1-202ENST00000624327 1645 ntTSL 2 BASIC9.31□□□□□ -0.92
ALDH1A1P00352 CEACAMP3-201ENST00000473762 1548 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
ALDH1A1P00352 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 U91328.2-201ENST00000606723 4130 ntTSL 2 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 NUSAP1-212ENST00000560747 2256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALDH1A1P00352 ULBP1-201ENST00000229708 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALDH1A1P00352 TARID-209ENST00000630119 4294 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
ALDH1A1P00352 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALDH1A1P00352 ASNS-214ENST00000455086 1588 ntTSL 2 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 TAAR2-201ENST00000275191 1157 ntAPPRIS P3 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
ALDH1A1P00352 RNU6-386P-201ENST00000362650 107 ntBASIC9.3□□□□□ -0.92
ALDH1A1P00352 RNU5B-4P-201ENST00000363508 111 ntBASIC9.3□□□□□ -0.92
ALDH1A1P00352 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 TRAV12-1-201ENST00000390433 340 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 RNA5SP35-201ENST00000391257 129 ntBASIC9.3□□□□□ -0.92
ALDH1A1P00352 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALDH1A1P00352 AL358779.1-201ENST00000415465 400 ntTSL 2 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 CCDC58P2-201ENST00000417131 366 ntBASIC9.3□□□□□ -0.92
ALDH1A1P00352 AL449283.1-202ENST00000418249 604 ntBASIC9.3□□□□□ -0.92
ALDH1A1P00352 NPM1P26-201ENST00000426339 738 ntBASIC9.3□□□□□ -0.92
ALDH1A1P00352 FO393414.1-201ENST00000428697 1184 ntBASIC9.3□□□□□ -0.92
ALDH1A1P00352 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 AC245047.5-201ENST00000437312 556 ntBASIC9.3□□□□□ -0.92
ALDH1A1P00352 ARF4P4-201ENST00000439608 520 ntBASIC9.3□□□□□ -0.92
ALDH1A1P00352 AL034418.1-201ENST00000448675 860 ntBASIC9.3□□□□□ -0.92
ALDH1A1P00352 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
ALDH1A1P00352 ANK3-213ENST00000486349 493 ntTSL 2 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 AC112518.2-201ENST00000508565 425 ntBASIC9.3□□□□□ -0.92
ALDH1A1P00352 RN7SKP248-201ENST00000516278 305 ntBASIC9.3□□□□□ -0.92
ALDH1A1P00352 IGHVII-78-1-201ENST00000521105 269 ntBASIC9.3□□□□□ -0.92
ALDH1A1P00352 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 AC089998.3-201ENST00000549715 493 ntBASIC9.3□□□□□ -0.92
ALDH1A1P00352 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 TAPT1-AS1-203ENST00000573950 510 ntTSL 3 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 ARGFXP2-201ENST00000579304 949 ntBASIC9.3□□□□□ -0.92
ALDH1A1P00352 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 AC005261.1-201ENST00000601567 712 ntTSL 2 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 AC079610.2-201ENST00000604818 690 ntBASIC9.3□□□□□ -0.92
ALDH1A1P00352 AL158211.4-201ENST00000606988 584 ntBASIC9.3□□□□□ -0.92
ALDH1A1P00352 AC007671.1-201ENST00000616957 830 ntBASIC9.3□□□□□ -0.92
ALDH1A1P00352 pRNA.9-201ENST00000618609 89 ntBASIC9.3□□□□□ -0.92
ALDH1A1P00352 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALDH1A1P00352 ANO2-201ENST00000327087 3720 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
ALDH1A1P00352 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 APOL1-205ENST00000422706 2901 ntAPPRIS ALT2 TSL 3 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 DUSP3-201ENST00000226004 4110 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALDH1A1P00352 CELF1-205ENST00000395292 2191 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALDH1A1P00352 HS3ST5-202ENST00000411826 2744 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALDH1A1P00352 RCAN1-210ENST00000487990 2520 ntTSL 2 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 CAGE1-208ENST00000512086 2537 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 DDX53-201ENST00000327968 3629 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 FKBP14-201ENST00000222803 4960 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
ALDH1A1P00352 ZNF33A-208ENST00000628825 2854 ntAPPRIS ALT2 TSL 2 BASIC9.3□□□□□ -0.92
ALDH1A1P00352 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
ALDH1A1P00352 LINC01291-201ENST00000377469 3662 ntTSL 2 BASIC9.29□□□□□ -0.92
ALDH1A1P00352 RBFOX1-223ENST00000620507 4018 ntTSL 5 BASIC9.29□□□□□ -0.92
ALDH1A1P00352 RAB36-201ENST00000263116 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
ALDH1A1P00352 SF3B2-206ENST00000528302 3254 ntTSL 5 BASIC9.29□□□□□ -0.92
ALDH1A1P00352 UBLCP1-201ENST00000296786 2392 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
ALDH1A1P00352 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC9.29□□□□□ -0.92
ALDH1A1P00352 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC9.29□□□□□ -0.92
ALDH1A1P00352 PAPD4-204ENST00000453514 3523 ntAPPRIS P3 TSL 5 BASIC9.29□□□□□ -0.92
ALDH1A1P00352 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC9.29□□□□□ -0.92
ALDH1A1P00352 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC9.29□□□□□ -0.92
ALDH1A1P00352 GPR1-210ENST00000621141 2156 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
ALDH1A1P00352 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
ALDH1A1P00352 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
ALDH1A1P00352 CYP4A22-203ENST00000371891 2535 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
ALDH1A1P00352 MR1-205ENST00000434571 7479 ntTSL 5 BASIC9.29□□□□□ -0.92
ALDH1A1P00352 POU6F2-210ENST00000559001 2403 ntTSL 5 BASIC9.29□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms