Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 AP003097.1-201ENST00000530657 1135 ntBASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 AC121338.2-201ENST00000622535 1744 ntBASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 CYP21A1P-202ENST00000354927 1481 ntBASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 GABARAPL3-202ENST00000624044 1851 ntBASIC18.82■□□□□ 0.6
PCDHGB6Q9Y5F9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PCDHGB6Q9Y5F9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 GCSHP5-201ENST00000443090 522 ntBASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 AC093827.2-201ENST00000512654 315 ntBASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 AC006058.3-201ENST00000606217 1069 ntBASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 AP006294.2-201ENST00000641667 209 ntBASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDHGB6Q9Y5F9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 AC011484.1-201ENST00000377652 1995 ntBASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 AC128676.1-201ENST00000454392 318 ntBASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDHGB6Q9Y5F9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms