Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.96■□□□□ 0.15
LSM4Q9Y4Z0 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSM4Q9Y4Z0 TMEM179-206ENST00000616017 1645 ntBASIC15.96■□□□□ 0.15
LSM4Q9Y4Z0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSM4Q9Y4Z0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LSM4Q9Y4Z0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
LSM4Q9Y4Z0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LSM4Q9Y4Z0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC15.96■□□□□ 0.14
LSM4Q9Y4Z0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LSM4Q9Y4Z0 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LSM4Q9Y4Z0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LSM4Q9Y4Z0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 AC116050.2-201ENST00000612102 1779 ntBASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
LSM4Q9Y4Z0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
LSM4Q9Y4Z0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 AC073210.2-201ENST00000430369 194 ntBASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 AC069152.1-201ENST00000438030 544 ntBASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 CNN2P6-201ENST00000439038 900 ntBASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 AF201337.1-201ENST00000520239 748 ntBASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 AC133552.2-202ENST00000575694 574 ntBASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 AC133041.1-202ENST00000642053 222 ntBASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LSM4Q9Y4Z0 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 AL691432.2-201ENST00000607222 2038 ntBASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LSM4Q9Y4Z0 KRT18P20-201ENST00000548986 1279 ntBASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms