Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
NINLQ9Y2I6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
NINLQ9Y2I6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
NINLQ9Y2I6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
NINLQ9Y2I6 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
NINLQ9Y2I6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC27.42■■□□□ 1.98
NINLQ9Y2I6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC27.42■■□□□ 1.98
NINLQ9Y2I6 AL353708.3-201ENST00000610272 989 ntBASIC27.42■■□□□ 1.98
NINLQ9Y2I6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC27.42■■□□□ 1.98
NINLQ9Y2I6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
NINLQ9Y2I6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC27.42■■□□□ 1.98
NINLQ9Y2I6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
NINLQ9Y2I6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
NINLQ9Y2I6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
NINLQ9Y2I6 AC116351.2-201ENST00000606540 1585 ntBASIC27.41■■□□□ 1.98
NINLQ9Y2I6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
NINLQ9Y2I6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
NINLQ9Y2I6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
NINLQ9Y2I6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC27.41■■□□□ 1.98
NINLQ9Y2I6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC27.41■■□□□ 1.98
NINLQ9Y2I6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
NINLQ9Y2I6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC27.41■■□□□ 1.98
NINLQ9Y2I6 F2R-202ENST00000505600 442 ntTSL 2 BASIC27.41■■□□□ 1.98
NINLQ9Y2I6 TK2-213ENST00000563369 882 ntTSL 5 BASIC27.41■■□□□ 1.98
NINLQ9Y2I6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC27.41■■□□□ 1.98
NINLQ9Y2I6 AL445228.2-201ENST00000605589 952 ntBASIC27.41■■□□□ 1.98
NINLQ9Y2I6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
NINLQ9Y2I6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
NINLQ9Y2I6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 MIR4785-201ENST00000585005 73 ntBASIC27.4■■□□□ 1.98
NINLQ9Y2I6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 AC004264.1-201ENST00000608354 794 ntBASIC27.4■■□□□ 1.98
NINLQ9Y2I6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 KRT16P6-202ENST00000425692 1426 ntBASIC27.4■■□□□ 1.98
NINLQ9Y2I6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC27.4■■□□□ 1.98
NINLQ9Y2I6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
NINLQ9Y2I6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
NINLQ9Y2I6 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
NINLQ9Y2I6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
NINLQ9Y2I6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC27.39■■□□□ 1.98
NINLQ9Y2I6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC27.39■■□□□ 1.98
NINLQ9Y2I6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC27.39■■□□□ 1.98
NINLQ9Y2I6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
NINLQ9Y2I6 AF186192.3-201ENST00000583427 947 ntBASIC27.39■■□□□ 1.98
NINLQ9Y2I6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC27.39■■□□□ 1.98
NINLQ9Y2I6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
NINLQ9Y2I6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC27.39■■□□□ 1.97
NINLQ9Y2I6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC27.39■■□□□ 1.97
NINLQ9Y2I6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC27.38■■□□□ 1.97
NINLQ9Y2I6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC27.38■■□□□ 1.97
NINLQ9Y2I6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC27.38■■□□□ 1.97
NINLQ9Y2I6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
NINLQ9Y2I6 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
NINLQ9Y2I6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
NINLQ9Y2I6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
NINLQ9Y2I6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
NINLQ9Y2I6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
NINLQ9Y2I6 HTR7P1-201ENST00000538670 1336 ntBASIC27.38■■□□□ 1.97
NINLQ9Y2I6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC27.38■■□□□ 1.97
NINLQ9Y2I6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC27.37■■□□□ 1.97
NINLQ9Y2I6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC27.37■■□□□ 1.97
NINLQ9Y2I6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
NINLQ9Y2I6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC27.37■■□□□ 1.97
NINLQ9Y2I6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
NINLQ9Y2I6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC27.37■■□□□ 1.97
NINLQ9Y2I6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC27.37■■□□□ 1.97
NINLQ9Y2I6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC27.37■■□□□ 1.97
NINLQ9Y2I6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC27.37■■□□□ 1.97
NINLQ9Y2I6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC27.37■■□□□ 1.97
NINLQ9Y2I6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
NINLQ9Y2I6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC27.37■■□□□ 1.97
NINLQ9Y2I6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
NINLQ9Y2I6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
NINLQ9Y2I6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
NINLQ9Y2I6 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
NINLQ9Y2I6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
NINLQ9Y2I6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms